RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 NIPAL1Q6NVV3 410 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 PSMA8Q8TAA3 256 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 TSNARE1Q96NA8 513 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 GLIS2Q9BZE0 524 aaPredicted RBP15.37■□□□□ 0.05
PTBP1-201ENST00000349038 GBA3Q9H227 469 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 PRSS51A0A1B0GVH4 220 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 KCNK1O00180 336 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 TRIM13O60858 407 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 LSM8O95777 96 aaKnown RBP15.37■□□□□ 0.05
PTBP1-201ENST00000349038 DLGAP3O95886 979 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 NCK1P16333 377 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 POLR2BP30876 1174 aaKnown RBP15.37■□□□□ 0.05
PTBP1-201ENST00000349038 IDUAP35475 653 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 EPGNQ6UW88 154 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 RDM1Q8NG50 284 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 NLRP4Q96MN2 994 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 HAPLN2Q9GZV7 340 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 RNF19AQ9NV58 838 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 GIMAP2Q9UG22 337 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 DCDC2Q9UHG0 476 aa15.37■□□□□ 0.05
PTBP1-201ENST00000349038 COPG1Q9Y678 874 aaKnown RBP15.37■□□□□ 0.05
PTBP1-201ENST00000349038 COL11A2P13942 1736 aaPredicted RBP15.37■□□□□ 0.05
PTBP1-201ENST00000349038 A8MV72 311 aaPredicted RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 TAF4O00268 1085 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 APOL1O14791 398 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 INPP4BO15327 924 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 ERBB2P04626 1255 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 ATICP31939 592 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 TAP1Q03518 808 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 NFATC3Q12968 1075 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 KIF19Q2TAC6 998 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 FAM47CQ5HY64 1035 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 TANKQ92844 425 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 KCNN1Q92952 543 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 SIGLEC10Q96LC7 697 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 HEXIM2Q96MH2 286 aaKnown RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 IL12RB2Q99665 862 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 NPLQ9BXD5 320 aaPredicted RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 PLEKHA5Q9HAU0 1116 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 GPSM3Q9Y4H4 160 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 SPO11Q9Y5K1 396 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 H0Y858 1186 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 BCAS2O75934 225 aaPredicted RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 PIM1P11309 404 aaPredicted RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 MTHFD1P11586 935 aaKnown RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 HEATR6Q6AI08 1181 aaKnown RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 CCDC81Q6ZN84 652 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 PGAM4Q8N0Y7 254 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 PLD5Q8N7P1 536 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 ACDQ96AP0 544 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 SDCCAG3Q96C92 435 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 RSAD1Q9HA92 442 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 RAVER2Q9HCJ3 691 aaKnown RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 TRIM39Q9HCM9 518 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 PRDM8Q9NQV8 689 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 VPS45Q9NRW7 570 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 EVLQ9UI08 416 aaPredicted RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 HEATR9A2RTY3 570 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 IQCA1LA6NCM1 817 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 NOTOA8MTQ0 251 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 KPNA4O00629 521 aaPredicted RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 GABBR2O75899 941 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 DDHD2O94830 711 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 CHRM3P20309 590 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 TRIM25Q14258 630 aaKnown RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 BORAQ6PGQ7 559 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 MCPH1Q8NEM0 835 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 LRCH3Q96II8 777 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 CGRRF1Q99675 332 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 SYBUQ9NX95 663 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 TLK1Q9UKI8 766 aa15.36■□□□□ 0.05
PTBP1-201ENST00000349038 PRPF19Q9UMS4 504 aaKnown RBP15.36■□□□□ 0.05
PTBP1-201ENST00000349038 ZNF195O14628 629 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 GUCY1B2O75343 617 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 PTPN9P43378 593 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 SERPINB9P50453 376 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 FOXD4Q12950 439 aaPredicted RBP15.35■□□□□ 0.05
PTBP1-201ENST00000349038 NOMO1Q15155 1222 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 ZNF699Q32M78 642 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 HMBOX1Q6NT76 420 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 CARM1Q86X55 608 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 DHFR2Q86XF0 187 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 ZCCHC7Q8N3Z6 543 aaKnown RBP15.35■□□□□ 0.05
PTBP1-201ENST00000349038 RP9Q8TA86 221 aaKnown RBP15.35■□□□□ 0.05
PTBP1-201ENST00000349038 PBXIP1Q96AQ6 731 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 GLT1D1Q96MS3 346 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 BBS2Q9BXC9 721 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 SMARCAD1Q9H4L7 1026 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 NMRAL1Q9HBL8 299 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 PCDHA10Q9Y5I2 948 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 TRIM38O00635 465 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 PFDN6O15212 129 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 CHADO15335 359 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 HDAC3O15379 428 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 DGAT1O75907 488 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 C1QAP02745 245 aa15.35■□□□□ 0.05
PTBP1-201ENST00000349038 ENO2P09104 434 aaPredicted RBP15.35■□□□□ 0.05
PTBP1-201ENST00000349038 ACAT1P24752 427 aaKnown RBP15.35■□□□□ 0.05
PTBP1-201ENST00000349038 ADSLP30566 484 aaPredicted RBP15.35■□□□□ 0.05
PTBP1-201ENST00000349038 CCDC153Q494R4 210 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms