RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 POLBP06746 335 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 CA3P07451 260 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 PYGBP11216 843 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 MZF1P28698 734 aaPredicted RBP13.78□□□□□ -0.2
CDC42-202ENST00000344548 FOXN2P32314 431 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 CCT5P48643 541 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 NTHL1P78549 312 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 CREMQ03060 361 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 MSLNQ13421 630 aaPredicted RBP13.78□□□□□ -0.2
CDC42-202ENST00000344548 PABPC1LQ4VXU2 614 aaKnown RBP13.78□□□□□ -0.2
CDC42-202ENST00000344548 ZNF697Q5TEC3 545 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 CYS1Q717R9 158 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 LRRC34Q8IZ02 419 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 ZNF473Q8WTR7 871 aaKnown RBP13.78□□□□□ -0.2
CDC42-202ENST00000344548 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 FATE1Q969F0 183 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 EXOC2Q96KP1 924 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 CERS4Q9HA82 394 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 PLK2Q9NYY3 685 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 SAMD15Q9P1V8 674 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 SLC2A6Q9UGQ3 507 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 MAFFQ9ULX9 164 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 SSX2IPQ9Y2D8 614 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 IKBKGQ9Y6K9 419 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 NOTCH4Q99466 2003 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 NDUFAB1O14561 156 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.21e-7■■■■□ 24.7
CDC42-202ENST00000344548 SNAP91O60641 907 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 TBL1XO60907 577 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 NEBLO76041 1014 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 ASMTLO95671 621 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 DRD4P21917 467 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 CA4P22748 312 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 NR1H3Q13133 447 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 SLC5A9Q2M3M2 681 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 RABGAP1LQ5R372 815 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 LINGO4Q6UY18 593 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 TAX1BP1Q86VP1 789 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 BBS7Q8IWZ6 715 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 PAIP2Q9BPZ3 127 aaKnown RBP13.78□□□□□ -0.2
CDC42-202ENST00000344548 DNMT3BQ9UBC3 853 aaKnown RBP13.78□□□□□ -0.2
CDC42-202ENST00000344548 LZTS1Q9Y250 596 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 TBC1D30Q9Y2I9 924 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 ASB3Q9Y575 518 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 HCFC2Q9Y5Z7 792 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 FAM169AQ9Y6X4 670 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 MTCL1Q9Y4B5 1905 aaKnown RBP13.77□□□□□ -0.2
CDC42-202ENST00000344548 A0A1B0GVM2 712 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 TCAF2A6NFQ2 919 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 A6NNZ2 444 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 CLDN11O75508 207 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 BMP1P13497 986 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 ARNTP27540 789 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 NPY2RP49146 381 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 PGGT1BP53609 377 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 GEMP55040 296 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 TUBB8Q3ZCM7 444 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 HSP90AA5PQ58FG0 334 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 ACBD5Q5T8D3 534 aaPredicted RBP13.77□□□□□ -0.21
CDC42-202ENST00000344548 TTC39BQ5VTQ0 682 aaPredicted RBP13.77□□□□□ -0.21
CDC42-202ENST00000344548 RNF219Q5W0B1 726 aaPredicted RBP13.77□□□□□ -0.21
CDC42-202ENST00000344548 ESRP1Q6NXG1 681 aaKnown RBP13.77□□□□□ -0.21
CDC42-202ENST00000344548 PACS1Q6VY07 963 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 RBM23Q86U06 439 aaKnown RBP13.77□□□□□ -0.21
CDC42-202ENST00000344548 SPNS2Q8IVW8 549 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 ACVR1CQ8NER5 493 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 SHKBP1Q8TBC3 707 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 MRPS31Q92665 395 aaKnown RBP13.77□□□□□ -0.21
CDC42-202ENST00000344548 TADA1Q96BN2 335 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 SEMA3CQ99985 751 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 EMILIN2Q9BXX0 1053 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 IL22Q9GZX6 179 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 MAGEH1Q9H213 219 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 MAN1C1Q9NR34 630 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 CFAP97Q9P2B7 532 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 ZNF180Q9UJW8 692 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 SOX13Q9UN79 622 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 GBF1Q92538 1859 aa13.77□□□□□ -0.21
CDC42-202ENST00000344548 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.76□□□□□ -0.21
CDC42-202ENST00000344548 IQANK1A0A1B0GTG1 560 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 FAM237BA0A1B0GVD1 139 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 CBX4O00257 560 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 USP1O94782 785 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 FAM107AO95990 144 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 C1RP00736 705 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 MT-ND3P03897 115 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 PRKCGP05129 697 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 RHOCP08134 193 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 ADRA1DP25100 572 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 PBX2P40425 430 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 HNRNPH2P55795 449 aaKnown RBP13.76□□□□□ -0.21
CDC42-202ENST00000344548 ARF5P84085 180 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 ZNF177Q13360 481 aaPredicted RBP13.76□□□□□ -0.21
CDC42-202ENST00000344548 SHHQ15465 462 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 SPANXN3Q5MJ09 141 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 PPM1LQ5SGD2 360 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 CCDC149Q6ZUS6 474 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 MARK2Q7KZI7 788 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms