RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PPP2CAP67775 309 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 ACAP1Q15027 740 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 SETMARQ53H47 684 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-201ENST00000344376 PIP5KL1Q5T9C9 394 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 NAPEPLDQ6IQ20 393 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 ERN2Q76MJ5 926 aaKnown RBP16.37■□□□□ 0.21
ATG4B-201ENST00000344376 PLPP6Q8IY26 295 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 ARRDC3Q96B67 414 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 SNRNP25Q9BV90 132 aaKnown RBP16.37■□□□□ 0.21
ATG4B-201ENST00000344376 HDAC8Q9BY41 377 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 TM6SF2Q9BZW4 377 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 ZDHHC6Q9H6R6 413 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 TM7SF3Q9NS93 570 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 GPATCH2LQ9NWQ4 482 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 HECAQ9UBI9 543 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-201ENST00000344376 DMTF1Q9Y222 760 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 PCDHB9Q9Y5E1 797 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 SNX11Q9Y5W9 270 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 C10orf142B7Z368 130 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 DFNA5O60443 496 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 GSRP00390 522 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 MAT2AP31153 395 aaKnown RBP16.36■□□□□ 0.21
ATG4B-201ENST00000344376 SUZ12Q15022 739 aaKnown RBP16.36■□□□□ 0.21
ATG4B-201ENST00000344376 SPECC1LQ69YQ0 1117 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 NEK5Q6P3R8 708 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 LAYNQ6UX15 382 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 NAXDQ8IW45 347 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 UMODL1-AS1Q8N2C9 162 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 HMCESQ96FZ2 354 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 LRIG1Q96JA1 1093 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 TRIM7Q9C029 511 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 IL21RQ9HBE5 538 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 FNDC3AQ9Y2H6 1198 aaKnown RBP16.36■□□□□ 0.21
ATG4B-201ENST00000344376 PCDHGB2Q9Y5G2 931 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 WASF2Q9Y6W5 498 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 CACNA1EQ15878 2313 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 ADAMTS9Q9P2N4 1935 aa16.36■□□□□ 0.21
ATG4B-201ENST00000344376 CNOT1A5YKK6 2376 aaKnown RBP16.36■□□□□ 0.21
ATG4B-201ENST00000344376 LRCH4O75427 683 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 CD160O95971 181 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 ITGB7P26010 798 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 PMLP29590 882 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 PCK1P35558 622 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 CTSKP43235 329 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 CCT8P50990 548 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 NEK3P51956 506 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
ATG4B-201ENST00000344376 PPP6R3Q5H9R7 873 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-201ENST00000344376 CCDC122Q5T0U0 273 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 ALKBH5Q6P6C2 394 aaKnown RBP16.35■□□□□ 0.21
ATG4B-201ENST00000344376 LEKR1Q6ZMV7 388 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 RFX8Q6ZV50 586 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 OR2AP1Q8NGE2 309 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 PEBP4Q96S96 227 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 THAP2Q9H0W7 228 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 NOL6Q9H6R4 1146 aaKnown RBP16.35■□□□□ 0.21
ATG4B-201ENST00000344376 EBF2Q9HAK2 575 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
ATG4B-201ENST00000344376 ANGPTL2Q9UKU9 493 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 ACTL7AQ9Y615 435 aa16.35■□□□□ 0.21
ATG4B-201ENST00000344376 A0A087X0T9 212 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 SH3BP5O60239 455 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 RNGTTO60942 597 aaKnown RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 TMCC1O94876 653 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 FAM228BP0C875 321 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 NDST2P52849 883 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 SIM1P81133 766 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 RAD51Q06609 339 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 SERINC3Q13530 473 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 PIGHQ14442 188 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 GSE1Q14687 1217 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 CA9Q16790 459 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 INO80DQ53TQ3 878 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 FBXL19Q6PCT2 694 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 ARFGAP1Q8N6T3 406 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 RNF214Q8ND24 703 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 SETD7Q8WTS6 366 aaKnown RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 GDAP1L1Q96MZ0 367 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 KCTD15Q96SI1 283 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 OSBPL1AQ9BXW6 950 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 GDF3Q9NR23 364 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 IP6K2Q9UHH9 426 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 ANAPC7Q9UJX3 599 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 ARHGAP42A6NI28 874 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 PRAMEF26H0Y7S4 382 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 KRIT1O00522 736 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 FLRT2O43155 660 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 MAGEC1O60732 1142 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 PCDH8O95206 1070 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 POP4O95707 220 aaKnown RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 IGSF6O95976 241 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 ADRB3P13945 408 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 HNRNPH3P31942 346 aaKnown RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 TAS2R38P59533 333 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 RHOAP61586 193 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 STAT4Q14765 748 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 ZNF423Q2M1K9 1284 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 INAVAQ3KP66 663 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 BOLA3Q53S33 107 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms