RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 A0A087X1B8 175 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SMIM35A0A1B0GVV1 85 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 NFKBIEO00221 500 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ZSCAN9O15535 394 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 PEX11AO75192 247 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ITGB6P18564 788 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 MPSTP25325 297 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 CLK1P49759 484 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 LILRA4P59901 499 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 DAB2P98082 770 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 STK32CQ86UX6 486 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 OR56A4Q8NGH8 313 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 OR52K2Q8NGK3 314 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 MRPS31Q92665 395 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 HDAC10Q969S8 669 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 KLHL5Q96PQ7 755 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ASB2Q96Q27 587 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ELOVL6Q9H5J4 265 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 PIDD1Q9HB75 910 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 PARVBQ9HBI1 364 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 UBA2Q9UBT2 640 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 VWA7Q9Y334 891 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 PRRC2BQ5JSZ5 2229 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 SIN3BO75182 1162 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 LRIG2O94898 1065 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SNRPB2P08579 225 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 LIMK2P53671 638 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SLC18A1P54219 525 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 MSS51Q4VC12 460 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ARL13AQ5H913 290 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 SDHAF4Q5VUM1 108 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 RDH11Q8TC12 318 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 TRPC4APQ8TEL6 797 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 FAM120BQ96EK7 910 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 KCTD14Q9BQ13 255 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 CHCHD3Q9NX63 227 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 CLIC5Q9NZA1 410 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SFMBT1Q9UHJ3 866 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 EDIL3O43854 480 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 KRT6AP02538 564 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 KRT6BP04259 564 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 LMO2P25791 158 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 KRT6CP48668 564 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 RAD23AP54725 363 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 AIF1P55008 147 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 ST8SIA6P61647 398 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 MRPS6P82932 125 aaKnown RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 MAP2K5Q13163 448 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 BLMHQ13867 455 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 PDK3Q15120 406 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 DLG2Q15700 870 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 MARK2Q7KZI7 788 aaKnown RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 LPCAT2Q7L5N7 544 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 RRM2BQ7LG56 351 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 OTOP3Q7RTS5 596 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 OSCP1Q8WVF1 389 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 HNRNPABQ99729 332 aaKnown RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 SLC4A5Q9BY07 1137 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 FAM124BQ9H5Z6 455 aaPredicted RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 MYRFQ9Y2G1 1151 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 ARIH2O95376 493 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 GUCA1CO95843 209 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 ZNF7P17097 686 aaPredicted RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 PPIDQ08752 370 aaKnown RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 ILF2Q12905 390 aaKnown RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 PTPRNQ16849 979 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 PKN3Q6P5Z2 889 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 DLK2Q6UY11 383 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 DHRSXQ8N5I4 330 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 TNIP2Q8NFZ5 429 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 DQX1Q8TE96 717 aaKnown RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 C7orf43Q8WVR3 580 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 SEPT8Q92599 483 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 LENG8Q96PV6 779 aaPredicted RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 NR1H4Q96RI1 486 aaPredicted RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 DPY30Q9C005 99 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 GRIP2Q9C0E4 1043 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 HOXA2O43364 376 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 UGT1A9O60656 530 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 SNUPNO95149 360 aaKnown RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 AP2A1O95782 977 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 RPL9P32969 192 aaKnown RBP7.27□□□□□ -1.25
VCAN-202ENST00000342785 GRIA3P42263 894 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 CHN2P52757 468 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 CDK18Q07002 472 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 SREBF2Q12772 1141 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 GRM3Q14832 879 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 ARHGAP17Q68EM7 881 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 PRMT9Q6P2P2 845 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 CCDC81Q6ZN84 652 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 ADCK1Q86TW2 530 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 SH3GL1Q99961 368 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 DCUN1D5Q9BTE7 237 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 BDH2Q9BUT1 245 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 UGT1A7Q9HAW7 530 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 UGT1A10Q9HAW8 530 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 UGT1A8Q9HAW9 530 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 STARD7Q9NQZ5 370 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 DYRK4Q9NR20 520 aa7.27□□□□□ -1.25
VCAN-202ENST00000342785 AAASQ9NRG9 546 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms