RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PLSCR1O15162 318 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 RNASEH1O60930 286 aaKnown RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC18A2Q05940 514 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 SZRD1Q7Z422 152 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 MILR1Q7Z6M3 343 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 PLD6Q8N2A8 252 aaKnown RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 LRTOMTQ8WZ04 291 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 FIG4Q92562 907 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 C1orf50Q9BV19 199 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 PDZD7Q9H5P4 517 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 VTI1BQ9UEU0 232 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 SFMBT1Q9UHJ3 866 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 PPME1Q9Y570 386 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 SMIM31A0A1B0GVY4 71 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 ABLIM1O14639 778 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 H2AFYO75367 372 aaKnown RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 ADRA1BP35368 520 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 ESRP1Q6NXG1 681 aaKnown RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 FSTL5Q8N475 847 aaPredicted RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 ZNF555Q8NEP9 628 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 NRG4Q8WWG1 115 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 ZFRQ96KR1 1074 aaKnown RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 POLR1BQ9H9Y6 1135 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 LRFN2Q9ULH4 789 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 ATRNL1Q5VV63 1379 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 SNRPB2P08579 225 aaKnown RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 GNAZP19086 355 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 L1CAMP32004 1257 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 PCYT1AP49585 367 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 CDH15P55291 814 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 DDX39BQ13838 428 aaKnown RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 SYPL2Q5VXT5 272 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 MRNIPQ6NTE8 343 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 ADCK1Q86TW2 530 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 MICU2Q8IYU8 434 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 TMCO5AQ8N6Q1 288 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 FNDC5Q8NAU1 212 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 KLRG1Q96E93 195 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 SIGLEC10Q96LC7 697 aa12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 KCTD14Q9BQ13 255 aaPredicted RBP12.58□□□□□ -0.4
SNRNP48-201ENST00000342415 MSI1O43347 362 aaKnown RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 PYGLP06737 847 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 RAB10P61026 200 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 TCEAL1Q15170 157 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 NR6A1Q15406 480 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 ATP6AP1LQ52LC2 224 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SAMD4BQ5PRF9 694 aaKnown RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC9A4Q6AI14 798 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 RIOX2Q8IUF8 465 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 OFCC1Q8IZS5 231 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 NIPA2Q8N8Q9 360 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 CDCA5Q96FF9 252 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 EXOC2Q96KP1 924 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 RTKNQ9BST9 563 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 MTG1Q9BT17 334 aaPredicted RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC25A23Q9BV35 468 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC30A1Q9Y6M5 507 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 A0A1B0GVG6 124 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 NCAM2O15394 837 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 TBC1D4O60343 1298 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 GLP2RO95838 553 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 LINC00032P0C843 101 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 ITGAXP20702 1163 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 CD86P42081 329 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 CHRNA4P43681 627 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC18A1P54219 525 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 NR1H2P55055 460 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 MRPS5P82675 430 aaKnown RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 PTRHD1Q6GMV3 140 aaKnown RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 BNIPLQ7Z465 357 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 PQLC3Q8N755 202 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 PTGR2Q8N8N7 351 aaPredicted RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 ENDOVQ8N8Q3 282 aaKnown RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 PNPLA1Q8N8W4 532 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 CHCHD3Q9NX63 227 aaKnown RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 C6orf203Q9P0P8 240 aaPredicted RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 CCDC189A1A4V9 331 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SH3BGRLO75368 114 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 HGFP14210 728 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 TPSB2P20231 275 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 RPS6KA3P51812 740 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 PITX1P78337 314 aaPredicted RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 CHRNB3Q05901 458 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 MBTD1Q05BQ5 628 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 DGCR6Q14129 220 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 TPSAB1Q15661 275 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC25A52Q3SY17 297 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 ARHGAP17Q68EM7 881 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 SPPL2CQ8IUH8 684 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 KBTBD2Q8IY47 623 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 DHRSXQ8N5I4 330 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 LENG1Q96BZ8 264 aaPredicted RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 PTCD3Q96EY7 689 aaKnown RBP12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 HSFY1Q96LI6 401 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms