RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 DNTTP04053 509 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 PEX5P50542 639 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 ITKQ08881 620 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 ZNF569Q5MCW4 686 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 ZNF776Q68DI1 518 aaPredicted RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 RALGAPA1Q6GYQ0 2036 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 LZTR1Q8N653 840 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 EXD1Q8NHP7 514 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 NT5MQ9NPB1 228 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 KCNK1O00180 336 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 MUSKO15146 869 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 MAP3K13O43283 966 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 ZSCAN12O43309 604 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 MAFKO60675 156 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 LEFTY1O75610 366 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 PAPSS2O95340 614 aaPredicted RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 PIGNO95427 931 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 CHRNA3P32297 505 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 GARSP41250 739 aaKnown RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 TPMTP51580 245 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 NRLP54845 237 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 ELAVL3Q14576 367 aaKnown RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 ZNF235Q14590 738 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 LBRQ14739 615 aaKnown RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 PAFAH1B3Q15102 231 aaKnown RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 CST6Q15828 149 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 CARD16Q5EG05 197 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 SLC9A4Q6AI14 798 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 WDR5BQ86VZ2 330 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 RASSF3Q86WH2 238 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 TMEFF1Q8IYR6 380 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 SLC35F6Q8N357 371 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 PAF1Q8N7H5 531 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 PIP4K2CQ8TBX8 421 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 ZNF419Q96HQ0 510 aaPredicted RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 RETREG1Q9H6L5 497 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 LHX3Q9UBR4 397 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 IL36AQ9UHA7 158 aa13.43□□□□□ -0.26
TUBD1-202ENST00000340993 MBD1Q9UIS9 605 aaPredicted RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
TUBD1-202ENST00000340993 TCRBV7S2A1N4TA0A589 114 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 KCNK3O14649 394 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 NEBLO76041 1014 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 UGT2B4P06133 528 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 SLC8A1P32418 973 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 SCNN1BP51168 640 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 IL10RBQ08334 325 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 GALNT2Q10471 571 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 SIM2Q14190 667 aaPredicted RBP13.42□□□□□ -0.26
TUBD1-202ENST00000340993 E2F5Q15329 346 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 RPS6KA1Q15418 735 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 CCDC6Q16204 474 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 USP39Q53GS9 565 aaKnown RBP13.42□□□□□ -0.26
TUBD1-202ENST00000340993 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.42□□□□□ -0.26
TUBD1-202ENST00000340993 KBTBD6Q86V97 674 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 HDDC3Q8N4P3 179 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 AADATQ8N5Z0 425 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 HES6Q96HZ4 224 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 CALR3Q96L12 384 aaKnown RBP13.42□□□□□ -0.26
TUBD1-202ENST00000340993 OMDQ99983 421 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 OSBPL8Q9BZF1 889 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 RSPH9Q9H1X1 276 aaPredicted RBP13.42□□□□□ -0.26
TUBD1-202ENST00000340993 FBXL12Q9NXK8 326 aa13.42□□□□□ -0.26
TUBD1-202ENST00000340993 ATXN2Q99700 1313 aaKnown RBP13.42□□□□□ -0.26
TUBD1-202ENST00000340993 EP300Q09472 2414 aaPredicted RBP13.41□□□□□ -0.26
TUBD1-202ENST00000340993 TARSL2A2RTX5 802 aaKnown RBP13.41□□□□□ -0.26
TUBD1-202ENST00000340993 ZSCAN5CA6NGD5 496 aaPredicted RBP13.41□□□□□ -0.26
TUBD1-202ENST00000340993 IGSF6O95976 241 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 PRKCGP05129 697 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 CLCN6P51797 869 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 GEMIN4P57678 1058 aaKnown RBP13.41□□□□□ -0.26
TUBD1-202ENST00000340993 SEMG2Q02383 582 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 RPL6Q02878 288 aaKnown RBP13.41□□□□□ -0.26
TUBD1-202ENST00000340993 TMCO4Q5TGY1 634 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 MEI1Q5TIA1 1274 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 MAMSTRQ6ZN01 415 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 PGBD5Q8N414 524 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 PCDH20Q8N6Y1 951 aaKnown RBP13.41□□□□□ -0.26
TUBD1-202ENST00000340993 OR2AP1Q8NGE2 309 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 NSMCE1Q8WV22 266 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 SNX19Q92543 992 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 TOE1Q96GM8 510 aaKnown RBP13.41□□□□□ -0.26
TUBD1-202ENST00000340993 SPACA7Q96KW9 195 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 CCDC114Q96M63 670 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 PRRX2Q99811 253 aa13.41□□□□□ -0.26
TUBD1-202ENST00000340993 IGHV1OR15-9A0A0B4J2B8 117 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 MIF4GDA9UHW6 222 aaKnown RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 H7C0C1 242 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ACSL1P33121 698 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 MMP13P45452 471 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ATP5OP48047 213 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 SNRPD1P62314 119 aaKnown RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 OTUD4Q01804 1114 aaKnown RBP13.4□□□□□ -0.26
TUBD1-202ENST00000340993 NHLH1Q02575 133 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 SLC20A2Q08357 652 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ZBTB17Q13105 803 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 TFDP2Q14188 446 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 MAP7D1Q3KQU3 841 aa13.4□□□□□ -0.26
TUBD1-202ENST00000340993 ZNF528Q3MIS6 628 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms