RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 MYBPHLA2RUH7 354 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 H3BSA7 217 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 FBXO21O94952 628 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 CTSHP09668 335 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 FAM200BP0CF97 657 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 KYAT1Q16773 422 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 MAP7D1Q3KQU3 841 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 DCAF4L1Q3SXM0 396 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 MARCH8Q5T0T0 291 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 STXBP5Q5T5C0 1151 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 OR9I1Q8NGQ6 314 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 GRIN3AQ8TCU5 1115 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 TMEM40Q8WWA1 233 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 C11orf84Q9BUA3 381 aaPredicted RBP14.6□□□□□ -0.07
CPSF7-201ENST00000340437 COMMD3-BMI1R4GMX3 469 aa14.6□□□□□ -0.07
CPSF7-201ENST00000340437 RNASEH2AO75792 299 aaKnown RBP14.59□□□□□ -0.07
CPSF7-201ENST00000340437 STMN1P16949 149 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 EPHX2P34913 555 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 LILRA4P59901 499 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 PRKAA1Q13131 559 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 TMED1Q13445 227 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 OTUD1Q5VV17 481 aaPredicted RBP14.59□□□□□ -0.07
CPSF7-201ENST00000340437 KRT80Q6KB66 452 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 CLEC20AQ6ZU45 233 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 ZBTB46Q86UZ6 589 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 CIB1Q99828 191 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 FSD1LQ9BXM9 530 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 TRIM8Q9BZR9 551 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.59□□□□□ -0.07
CPSF7-201ENST00000340437 IGSF9Q9P2J2 1179 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 POLR2AP24928 1970 aaKnown RBP14.59□□□□□ -0.07
CPSF7-201ENST00000340437 PFDN1O60925 122 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 GLDCP23378 1020 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 ADGRE1Q14246 886 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 ARL13BQ3SXY8 428 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 CLEC6AQ6EIG7 209 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 KLHDC10Q6PID8 442 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 ADGRG6Q86SQ4 1221 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 RP9Q8TA86 221 aaKnown RBP14.59□□□□□ -0.07
CPSF7-201ENST00000340437 LRIG2O94898 1065 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 USP46P62068 366 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 MTX3Q5HYI7 312 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 ZC3HC1Q86WB0 502 aaKnown RBP14.59□□□□□ -0.07
CPSF7-201ENST00000340437 IFNEQ86WN2 208 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 ZNF560Q96MR9 790 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 NPY6RQ99463 290 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 V9GYQ6 96 aa14.59□□□□□ -0.07
CPSF7-201ENST00000340437 FAM58BPP0C7Q3 252 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 PABPC4LP0CB38 370 aaKnown RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 GABRB3P28472 473 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 RPL5P46777 297 aaKnown RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 AFF1P51825 1210 aaKnown RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 TAS2R39P59534 338 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CDH17Q12864 832 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 SNAPC2Q13487 334 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 SLC12A1Q13621 1099 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 ZNF423Q2M1K9 1284 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 NOL9Q5SY16 702 aaKnown RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 OGFRL1Q5TC84 451 aaPredicted RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 ITPRIPL1Q6GPH6 555 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 TAPT1Q6NXT6 567 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 TMEM135Q86UB9 458 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 ERO1BQ86YB8 467 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 METTL25Q8N6Q8 603 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 OR6P1Q8NGX9 317 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 SNRNP27Q8WVK2 155 aaKnown RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 SLC45A3Q96JT2 553 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CCT7Q99832 543 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 NFKBIZQ9BYH8 718 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 EPS15L1Q9UBC2 864 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 GIMAP2Q9UG22 337 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 SAC3D1A6NKF1 404 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 E7ENX8 843 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 DCLK1O15075 740 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 DAB1O75553 588 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 TFAP2AP05549 437 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CKMT2P17540 419 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CYP2B6P20813 491 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CDH13P55290 713 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CDH15P55291 814 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 PSME3P61289 254 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 DBN1Q16643 649 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 MYLK3Q32MK0 819 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CYS1Q717R9 158 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CRYBG2Q8N1P7 616 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 LRRC52Q8N7C0 313 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 ARRDC4Q8NCT1 418 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 ZFP28Q8NHY6 868 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 LPPQ93052 612 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 DGCR14Q96DF8 476 aaKnown RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 DRC3Q9H069 523 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 NOL11Q9H8H0 719 aaKnown RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 COQ10BQ9H8M1 238 aa14.58□□□□□ -0.08
CPSF7-201ENST00000340437 EIF2B3Q9NR50 452 aaKnown RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 C6orf203Q9P0P8 240 aaPredicted RBP14.58□□□□□ -0.08
CPSF7-201ENST00000340437 CASTOR2A6NHX0 329 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 TMEM114B3SHH9 223 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 SLC35E2BP0CK96 405 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 CASP2P42575 452 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 MYBPC1Q00872 1141 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms