RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 LRRC37BQ96QE4 947 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 SPON2Q9BUD6 331 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 OXCT2Q9BYC2 517 aaPredicted RBP15.68■□□□□ 0.1
MBD1-203ENST00000339998 AAR2Q9Y312 384 aaKnown RBP15.68■□□□□ 0.1
MBD1-203ENST00000339998 ZFP37Q9Y6Q3 630 aaPredicted RBP15.68■□□□□ 0.1
MBD1-203ENST00000339998 A8MUI8 341 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 HOXA2O43364 376 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 RAMP2O60895 175 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 AHSGP02765 367 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 MMP2P08253 660 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 ZDHHC11BP0C7U3 371 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 GLRBP48167 497 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 NPY2RP49146 381 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 ELAVL2Q12926 359 aaKnown RBP15.68■□□□□ 0.1
MBD1-203ENST00000339998 TAF1BQ53T94 588 aaPredicted RBP15.68■□□□□ 0.1
MBD1-203ENST00000339998 OTOP2Q7RTS6 562 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 C10orf107Q8IVU9 208 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 VPS39Q96JC1 886 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 SPATA17Q96L03 361 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 NSMCE3Q96MG7 304 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 CPNE1Q99829 537 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 TMEM175Q9BSA9 504 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 USH1CQ9Y6N9 552 aa15.68■□□□□ 0.1
MBD1-203ENST00000339998 MIA3Q5JRA6 1907 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 ZNF840PA6NDX5 716 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 OR51F1A6NGY5 319 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 IGLV3-27P01718 113 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 BPGMP07738 259 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 MYL2P10916 166 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 SERPINB3P29508 390 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 ALDH3A1P30838 453 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 RANBP10Q6VN20 620 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 MFSD6LQ8IWD5 586 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 TMEM120AQ9BXJ8 343 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 ACTR5Q9H9F9 607 aaPredicted RBP15.67■□□□□ 0.1
MBD1-203ENST00000339998 ARMCX1Q9P291 453 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 HEY2Q9UBP5 337 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 TBX21Q9UL17 535 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 STK38LQ9Y2H1 464 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 IGLV3-10A0A075B6K4 115 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 A0A0U1RQS6 177 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 ANXA9O76027 345 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 ATP5C1P36542 298 aaKnown RBP15.67■□□□□ 0.1
MBD1-203ENST00000339998 PTPRRQ15256 657 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 LRRC26Q2I0M4 334 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 TTC31Q49AM3 519 aaPredicted RBP15.67■□□□□ 0.1
MBD1-203ENST00000339998 PKN3Q6P5Z2 889 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 TIFABQ6ZNK6 161 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 ALYREFQ86V81 257 aaKnown RBP15.67■□□□□ 0.1
MBD1-203ENST00000339998 KIFC1Q9BW19 673 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 UBE2OQ9C0C9 1292 aaKnown RBP15.67■□□□□ 0.1
MBD1-203ENST00000339998 UXTQ9UBK9 157 aaPredicted RBP15.67■□□□□ 0.1
MBD1-203ENST00000339998 CHD9Q3L8U1 2897 aa15.67■□□□□ 0.1
MBD1-203ENST00000339998 A0A096LPK6 155 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 PLIN3O60664 434 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 DLDP09622 509 aaKnown RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 LIMK2P53671 638 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 FYB2Q5VWT5 728 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 KDELC1Q6UW63 502 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 AGR3Q8TD06 166 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 BEGAINQ9BUH8 593 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 SIRPGQ9P1W8 387 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 REV3LO60673 3130 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 NRG2O14511 850 aaPredicted RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 C2P06681 752 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 T-ENOLP0DO92 83 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 BMP1P13497 986 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 PCLAFQ15004 111 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 PCID2Q5JVF3 399 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 FAM219BQ5XKK7 198 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 TIGD7Q6NT04 549 aaPredicted RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 SLC41A1Q8IVJ1 513 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 TMEM169Q96HH4 297 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 PRICKLE1Q96MT3 831 aaPredicted RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 SEMA3CQ99985 751 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 TRIM55Q9BYV6 548 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 SUDS3Q9H7L9 328 aaPredicted RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 TRIM43BA6NCK2 446 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 WASH4PA8MWX3 477 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 EFEMP2O95967 443 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 TROVE2P10155 538 aaKnown RBP eCLIP15.66■□□□□ 0.1
MBD1-203ENST00000339998 CCR10P46092 362 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 RGRP47804 291 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 GEMP55040 296 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 ZXDBP98169 803 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 NRG1Q02297 640 aaPredicted RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 HNRNPDQ14103 355 aaKnown RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 BTG3Q14201 252 aaPredicted RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 GALNT3Q14435 633 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 TAF12Q16514 161 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 GRTP1Q5TC63 336 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 PPP1R14CQ8TAE6 165 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 ZNF461Q8TAF7 563 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 TOP1MTQ969P6 601 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 TRIM43Q96BQ3 446 aaPredicted RBP15.66■□□□□ 0.1
MBD1-203ENST00000339998 KLHL29Q96CT2 875 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 NDNQ99608 321 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 EBF4Q9BQW3 602 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 TRPC7Q9HCX4 862 aa15.66■□□□□ 0.1
MBD1-203ENST00000339998 DNMT3LQ9UJW3 386 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms