RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ZNF567Q8N184 647 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 FBXO25Q8TCJ0 367 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 ZNF208O43345 1280 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 MTA2O94776 668 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 FADS2O95864 444 aaKnown RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 TMEM253P0C7T8 217 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 CD40LGP29965 261 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 BOLA3Q53S33 107 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 PPP1R18Q6NYC8 613 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 ATCAYQ86WG3 371 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 TIPINQ9BVW5 301 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 SLC24A2Q9UI40 661 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 GGA2Q9UJY4 613 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 KCNIP3Q9Y2W7 256 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 ALG5Q9Y673 324 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 CTSEP14091 401 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 UBA1P22314 1058 aaKnown RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 OLR1P78380 273 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 MBTD1Q05BQ5 628 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 ELOAQ14241 798 aaKnown RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 EGFLAMQ63HQ2 1017 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 GLB1LQ6UWU2 654 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 AGAP11Q8TF27 550 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 CIPCQ9C0C6 399 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 GANQ9H2C0 597 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 FLT1P17948 1338 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 ZMPSTE24O75844 475 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 NT5C2P49902 561 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 SPP2Q13103 211 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 ACAP2Q15057 778 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 AP5B1Q2VPB7 878 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 TAS2R13Q9NYV9 303 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 OR2AT4A6NND4 320 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 GTPBP1O00178 669 aaKnown RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 VPS4BO75351 444 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 TXNP10599 105 aaKnown RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 BUD31P41223 144 aaPredicted RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 SFRP1Q8N474 314 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 SAR1AQ9NR31 198 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 SAE1Q9UBE0 346 aaPredicted RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 DMTF1Q9Y222 760 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 POLR1AO95602 1720 aaPredicted RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 LOC102724428A0A0B4J2F2 783 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 OR10H2O60403 315 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 JCHAINP01591 159 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 TYMPP19971 482 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 RPL9P32969 192 aaKnown RBP12.97□□□□□ -0.33
USP47-202ENST00000339865 ARFIP1P53367 373 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 SIK1P57059 783 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 DGLUCYQ7Z3D6 616 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 TUBGCP5Q96RT8 1024 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 ZFP14Q9HCL3 533 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 C15orf38-AP3S2A0A0A6YYH1 394 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 F5H6K3 240 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 BTN3A1O00481 513 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 NR2F6P10588 404 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 SRCP12931 536 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 CRABP2P29373 138 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 AP3S2P59780 193 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 NAA20P61599 178 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 KLRC3Q07444 240 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 PROSER3Q2NL68 480 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 FAM76BQ5HYJ3 339 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 SPERTQ8NA61 448 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 STRBPQ96SI9 672 aaKnown RBP12.96□□□□□ -0.33
USP47-202ENST00000339865 IFT46Q9NQC8 304 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 PIH1D3Q9NQM4 214 aaKnown RBP12.96□□□□□ -0.33
USP47-202ENST00000339865 TMEM216Q9P0N5 145 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 VPS28Q9UK41 221 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 CBX4O00257 560 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 SKP1P63208 163 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 E2F2Q14209 437 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 DIRAS2Q96HU8 199 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 RUSC1Q9BVN2 902 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 ST3GAL5Q9UNP4 418 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 E7ENX8 843 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 KIAA0391O15091 583 aaKnown RBP12.96□□□□□ -0.33
USP47-202ENST00000339865 CD151P48509 253 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 MARSP56192 900 aaKnown RBP12.96□□□□□ -0.33
USP47-202ENST00000339865 ELF3P78545 371 aaPredicted RBP12.96□□□□□ -0.33
USP47-202ENST00000339865 QRICH1Q2TAL8 776 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 CES3Q6UWW8 571 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 ZYG11AQ6WRX3 759 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 ARPINQ7Z6K5 226 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 STARD8Q92502 1023 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 FBXO32Q969P5 355 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
USP47-202ENST00000339865 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
USP47-202ENST00000339865 U3KQV3 271 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 EME2A4GXA9 379 aaPredicted RBP12.96□□□□□ -0.33
USP47-202ENST00000339865 TTC34A8MYJ7 566 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 H7C1W4 665 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 PSMD9O00233 223 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 TRIM38O00635 465 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 CCNYL3P0C7X3 344 aa12.96□□□□□ -0.33
USP47-202ENST00000339865 NR2F1P10589 423 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms