RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 MMADHCQ9H3L0 296 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP1-201ENST00000339269 RHOJQ9H4E5 214 aa13.17□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CATSPERBQ9H7T0 1116 aa13.17□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ATP13A1Q9HD20 1204 aa13.17□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GEMIN8Q9NWZ8 242 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PRG3Q9Y2Y8 225 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TCAF1Q9Y4C2 921 aa13.17□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TIMM44O43615 452 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SOAT2O75908 522 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SLC35E2BP0CK96 405 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CDK7P50613 346 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 RAP1GDS1P52306 607 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MPP1Q00013 466 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ALFQ53S48 1182 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 VWA5B1Q5TIE3 1220 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MON1AQ86VX9 555 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CCDC117Q8IWD4 279 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PPP1R14CQ8TAE6 165 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MAPK15Q8TD08 544 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 DIS3LQ8TF46 1054 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MYEOVQ96EZ4 313 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 FUBP3Q96I24 572 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 B3GALT6Q96L58 329 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 C1orf74Q96LT6 269 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GPR78Q96P69 363 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SIKE1Q9BRV8 207 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 FTHL17Q9BXU8 183 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 STN1Q9H668 368 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■□□□ 12.2
CDK5RAP1-201ENST00000339269 DNAJC28Q9NX36 388 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TAGLN3Q9UI15 199 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 NOD1Q9Y239 953 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TLR6Q9Y2C9 796 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 IGLV3-10A0A075B6K4 115 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 B2RBV5 119 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PHGDHO43175 533 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ANXA9O76027 345 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CNTN5O94779 1100 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MMP2P08253 660 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 DNAJB2P25686 324 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CCR10P46092 362 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 DLG1Q12959 904 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TCTN1Q2MV58 587 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MS4A13Q5J8X5 152 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 RSPO2Q6UXX9 243 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CEP97Q8IW35 865 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 NUP93Q8N1F7 819 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 UMODL1-AS1Q8N2C9 162 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ZNF781Q8N8C0 355 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ATAD1Q8NBU5 361 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GPR152Q8TDT2 470 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 HMCESQ96FZ2 354 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PAWRQ96IZ0 340 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SERPINB11Q96P15 392 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GATA5Q9BWX5 397 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MRM3Q9HC36 420 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ACSS2Q9NR19 701 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 IPO11Q9UI26 975 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SLC39A10Q9ULF5 831 aa13.16□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PDE4DIPQ5VU43 2346 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ARHGEF37A1IGU5 675 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 J3KR12 359 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TK2O00142 265 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 AURKAO14965 403 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 PMPCBO75439 489 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CABYRO75952 493 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 KRT36O76013 467 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TBX18O95935 607 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MAGEA11P43364 429 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 OR1G1P47890 313 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 NUMBP49757 651 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GATMP50440 423 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GEMP55040 296 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 RCN2Q14257 317 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ZNF460Q14592 562 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ANO4Q32M45 955 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 RNF180Q86T96 592 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SLC41A1Q8IVJ1 513 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 FATE1Q969F0 183 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 TADA1Q96BN2 335 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 CLPTM1LQ96KA5 538 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 ATXN3LQ9H3M9 355 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 NMRAL1Q9HBL8 299 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 MARCH5Q9NX47 278 aa13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP1-201ENST00000339269 AP3B1O00203 1094 aa13.14□□□□□ -0.31
CDK5RAP1-201ENST00000339269 MAGEC1O60732 1142 aa13.14□□□□□ -0.31
CDK5RAP1-201ENST00000339269 VAPBO95292 243 aa13.14□□□□□ -0.31
CDK5RAP1-201ENST00000339269 IGLV3-27P01718 113 aa13.14□□□□□ -0.31
CDK5RAP1-201ENST00000339269 CD1EP15812 388 aa13.14□□□□□ -0.31
CDK5RAP1-201ENST00000339269 SLC1A2P43004 574 aa13.14□□□□□ -0.31
CDK5RAP1-201ENST00000339269 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP1-201ENST00000339269 WNT3AP56704 352 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms