RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 FAM180BQ6P0A1 224 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TATDN1Q6P1N9 297 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ANKS1BQ7Z6G8 1248 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 NLRX1Q86UT6 975 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 C8orf59Q8N0T1 100 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CLIP4Q8N3C7 705 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 AMER2Q8N7J2 671 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 XAGE3Q8WTP9 111 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 IDI2Q9BXS1 227 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ASPSCR1Q9BZE9 553 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RACGAP1Q9H0H5 632 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MCUBQ9NWR8 336 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MTRRQ9UBK8 725 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 NDRG3Q9UGV2 375 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 LAMP5Q9UJQ1 280 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 GPSM3Q9Y4H4 160 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 BCL9LQ86UU0 1499 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 A0A0A6YYJ9 748 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 LOC102724428A0A0B4J2F2 783 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SLCO1B7G3V0H7 640 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ZBTB24O43167 697 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 USP12O75317 370 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TNFRSF21O75509 655 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 POP4O95707 220 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 BMPR1AP36894 532 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SIK1P57059 783 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 EVA1CP58658 441 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TEKQ02763 1124 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SLC39A6Q13433 755 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RAB39AQ14964 217 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SSX2Q16385 188 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 LBHQ53QV2 105 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PITRM1Q5JRX3 1037 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ERICH5Q6P6B1 374 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PGAP1Q75T13 922 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SV2BQ7L1I2 683 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ADGRG3Q86Y34 549 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PHC2Q8IXK0 858 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ZCCHC9Q8N567 271 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TXNDC5Q8NBS9 432 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ARRDC4Q8NCT1 418 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PIWIL2Q8TC59 973 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 USP13Q92995 863 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SLC25A36Q96CQ1 311 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 DUS3LQ96G46 650 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 KLHL31Q9H511 634 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MAD2L2Q9UI95 211 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 AFG3L2Q9Y4W6 797 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 DLC1Q96QB1 1528 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM82A0PJX8 343 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 DBX1A6NMT0 343 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 WASH4PA8MWX3 477 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 POC1B-GALNT4F8VUJ3 575 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 H0YAE9 185 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 SGK1O00141 431 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 CPNE6O95741 557 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 TCN1P20061 433 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 SERPINB9P50453 376 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 ADAM15Q13444 863 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 UBE2UQ5VVX9 321 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 RSBN1LQ6PCB5 846 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 DSG4Q86SJ6 1040 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 DHRSXQ8N5I4 330 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 OR52K1Q8NGK4 314 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 DHX38Q92620 1227 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 GLG1Q92896 1179 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 MSANTD3Q96H12 275 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 FAM111AQ96PZ2 611 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 C7orf25Q9BPX7 421 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 BLZF1Q9H2G9 400 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 LIN28AQ9H9Z2 209 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 CATSPERZQ9NTU4 200 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 VAV3Q9UKW4 847 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 PA2G4Q9UQ80 394 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF609O15014 1411 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 CDK14O94921 469 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 ARIH2O95376 493 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 TNNC2P02585 160 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 MATN1P21941 496 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 SCNN1DP51172 638 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 HSD17B7P56937 341 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 RNF4P78317 190 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 FKBP3Q00688 224 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 FAAP100Q0VG06 881 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 GALNT2Q10471 571 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 HGSNATQ68CP4 663 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 PRMT9Q6P2P2 845 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 PDXDC2PQ6P474 469 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 C12orf29Q8N999 325 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 FAM47BQ8NA70 645 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 PCSK9Q8NBP7 692 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 SMG8Q8ND04 991 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 SRFBP1Q8NEF9 429 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 METTL6Q8TCB7 284 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 RPL3LQ92901 407 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 FATE1Q969F0 183 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 ZC3H10Q96K80 434 aaKnown RBP4.2□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF251Q9BRH9 671 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 ANO3Q9BYT9 981 aa4.2□□□□□ -1.74
NEDD4-201ENST00000338963 NMUR2Q9GZQ4 415 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms