RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 ZBTB24O43167 697 aaPredicted RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 PHGDHO43175 533 aaKnown RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 ZNF189O75820 626 aaPredicted RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 FYNP06241 537 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 SBK3P0C264 359 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 FAM58BPP0C7Q3 252 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 SLC5A2P31639 672 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 NAGLUP54802 743 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 PPIDQ08752 370 aaKnown RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 SEMA3BQ13214 749 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 FAM219BQ5XKK7 198 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 TOP6BLQ8N6T0 577 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 SLC7A14Q8TBB6 771 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 GRIN3AQ8TCU5 1115 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 ACE2Q9BYF1 805 aaPredicted RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 ZNF696Q9H7X3 374 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 IARS2Q9NSE4 1012 aaKnown RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 NUP205Q92621 2012 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 SCN4AP35499 1836 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 NRP1O14786 923 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 HDAC3O15379 428 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 FGFR3P22607 806 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 AXLP30530 894 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 RPL14P50914 215 aaKnown RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 TKTL1P51854 596 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 SPATA6LQ8N4H0 392 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 NPWQ8N729 165 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 RP9Q8TA86 221 aaKnown RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 TMEM40Q8WWA1 233 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 ATP6V1E2Q96A05 226 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 NTAN1Q96AB6 310 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 ZNF512Q96ME7 567 aaPredicted RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 WDR6Q9NNW5 1121 aaKnown RBP20.21■□□□□ 0.83
CDCA4-201ENST00000336219 RAD54BQ9Y620 910 aa20.21■□□□□ 0.83
CDCA4-201ENST00000336219 PRSS51A0A1B0GVH4 220 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 SMIM35A0A1B0GVV1 85 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 CDK4P11802 303 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 TFEBP19484 476 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 CYP2B6P20813 491 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 CD68P34810 354 aaPredicted RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 PPARGP37231 505 aaPredicted RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 AIF1P55008 147 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 TPI1P60174 286 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 APOFQ13790 326 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 IL23RQ5VWK5 629 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 GTF3C2Q8WUA4 911 aaPredicted RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 CNDP1Q96KN2 507 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 MLPHQ9BV36 600 aaPredicted RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 GBA3Q9H227 469 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 SUDS3Q9H7L9 328 aaPredicted RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 LIN28AQ9H9Z2 209 aaKnown RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 CHRAC1Q9NRG0 131 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 ERI2A8K979 691 aaKnown RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 NCAM2O15394 837 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 CSPG5O95196 566 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 SMIM10L2AP0DMW4 78 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 SMIM10L2BP0DMW5 78 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 CYP2C9P11712 490 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 ME2P23368 584 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 SCAPQ12770 1279 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 MPP3Q13368 585 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 ART3Q13508 389 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 ZNF460Q14592 562 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 GRM3Q14832 879 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 UBXN11Q5T124 520 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 TMEM151AQ8N4L1 468 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 TMEM102Q8N9M5 508 aaPredicted RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 ADCY4Q8NFM4 1077 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 TMIGD2Q96BF3 282 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 ZFRQ96KR1 1074 aaKnown RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 C20orf96Q9NUD7 363 aaPredicted RBP20.2■□□□□ 0.82
CDCA4-201ENST00000336219 DMTF1Q9Y222 760 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 RAP2CQ9Y3L5 183 aa20.2■□□□□ 0.82
CDCA4-201ENST00000336219 C7orf72A4D263 438 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 TIMM44O43615 452 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 MAP3K7CLP57077 242 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 KCNMB4Q86W47 210 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 PGAM4Q8N0Y7 254 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 PDCD6IPQ8WUM4 868 aaKnown RBP20.19■□□□□ 0.82
CDCA4-201ENST00000336219 VPS39Q96JC1 886 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 SCYL1Q96KG9 808 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 TSPAN18Q96SJ8 248 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 MCMBPQ9BTE3 642 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 PCDHAC1Q9H158 963 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 ZNF385DQ9H6B1 395 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 UBP1Q9NZI7 540 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 CSE1LP55060 971 aaKnown RBP20.19■□□□□ 0.82
CDCA4-201ENST00000336219 SH3BGRP55822 239 aaPredicted RBP20.19■□□□□ 0.82
CDCA4-201ENST00000336219 ZBTB17Q13105 803 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 TMEM259Q4ZIN3 620 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 PCDH20Q8N6Y1 951 aaKnown RBP20.19■□□□□ 0.82
CDCA4-201ENST00000336219 CEP70Q8NHQ1 597 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 SREK1Q8WXA9 508 aaKnown RBP20.19■□□□□ 0.82
CDCA4-201ENST00000336219 MED10Q9BTT4 135 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 ULBP1Q9BZM6 244 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 DRC3Q9H069 523 aa20.19■□□□□ 0.82
CDCA4-201ENST00000336219 ACOT8O14734 319 aa20.18■□□□□ 0.82
CDCA4-201ENST00000336219 STRNO43815 780 aa20.18■□□□□ 0.82
CDCA4-201ENST00000336219 VAPBO95292 243 aa20.18■□□□□ 0.82
CDCA4-201ENST00000336219 HCAR3P49019 387 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms