RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 MFSD11O43934 449 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 KATNA1O75449 491 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SRP72O76094 671 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 MTA2O94776 668 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 MYL4P12829 197 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ADRA1BP35368 520 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CD86P42081 329 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SLC11A2P49281 568 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CDH13P55290 713 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ACTR3P61158 418 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PLOD1Q02809 727 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 POLD3Q15054 466 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 LRRC38Q5VT99 294 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ZNF280DQ6N043 979 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PAOXQ6QHF9 649 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 HFE2Q6ZVN8 426 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 LPCAT2Q7L5N7 544 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CIR1Q86X95 450 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PCDH20Q8N6Y1 951 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ATP6V0D2Q8N8Y2 350 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 DCBLD1Q8N8Z6 715 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SPATA13Q96N96 652 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ZMAT2Q96NC0 199 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 EFHD1Q9BUP0 239 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PAIP1Q9H074 479 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 WDR55Q9H6Y2 383 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 DNAAF2Q9NVR5 837 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 THAP1Q9NVV9 213 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 AAR2Q9Y312 384 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 AP4B1Q9Y6B7 739 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 MTSS1O43312 755 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 GLRA3O75311 464 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 METTL18O95568 372 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 DLDP09622 509 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PSMC3P17980 439 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 GP5P40197 560 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CCR3P51677 355 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PGGT1BP53609 377 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CRYBB1P53674 252 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PITX1P78337 314 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SP3Q02447 781 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CDH17Q12864 832 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 UNC93AQ86WB7 457 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ELMOD1Q8N336 334 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 OR52K2Q8NGK3 314 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 MOCOSQ96EN8 888 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 HSFY1Q96LI6 401 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ATP13A1Q9HD20 1204 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 HMX1Q9NP08 348 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SYBUQ9NX95 663 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CCDC167Q9P0B6 97 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 WARS2Q9UGM6 360 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 DRG1Q9Y295 367 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 MFHAS1Q9Y4C4 1052 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 MAGEB3O15480 346 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 ZBTB24O43167 697 aaPredicted RBP6.56□□□□□ -1.36
HMG20A-201ENST00000336216 ITM2AO43736 263 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 FBXO21O94952 628 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 SERPIND1P05546 499 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 ITGA2BP08514 1039 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 IQCF3P0C7M6 154 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 FAM58BPP0C7Q3 252 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 HNRNPLP14866 589 aaKnown RBP eCLIP6.56□□□□□ -1.362e-7■■□□□ 14
HMG20A-201ENST00000336216 GCAP28676 217 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 EPHA3P29320 983 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 RPL5P46777 297 aaKnown RBP6.56□□□□□ -1.36
HMG20A-201ENST00000336216 SEMG2Q02383 582 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 ITGA7Q13683 1181 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 BTG3Q14201 252 aaPredicted RBP6.56□□□□□ -1.36
HMG20A-201ENST00000336216 KRT33BQ14525 404 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 DLG2Q15700 870 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 FOXB2Q5VYV0 432 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 CLVS1Q8IUQ0 354 aaPredicted RBP6.56□□□□□ -1.36
HMG20A-201ENST00000336216 MIER2Q8N344 545 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 CYGBQ8WWM9 190 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 SDCCAG3Q96C92 435 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 DEFB118Q96PH6 123 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 TRIM62Q9BVG3 475 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 DUSP16Q9BY84 665 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 CASS4Q9NQ75 786 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 ZNF358Q9NW07 568 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 TRPM5Q9NZQ8 1165 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 RPL26L1Q9UNX3 145 aaKnown RBP6.56□□□□□ -1.36
HMG20A-201ENST00000336216 SLC8A2Q9UPR5 921 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 PLLPQ9Y342 182 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 HBS1LQ9Y450 684 aaKnown RBP6.56□□□□□ -1.36
HMG20A-201ENST00000336216 CDY1Q9Y6F8 540 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 NUMBLQ9Y6R0 609 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 SAC3D1A6NKF1 404 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 ANGPT2O15123 496 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 FOXD2O60548 495 aaPredicted RBP6.56□□□□□ -1.36
HMG20A-201ENST00000336216 HMOX2P30519 316 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 OR1D2P34982 312 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 SERPINB8P50452 374 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 GEMP55040 296 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 PRKCZQ05513 592 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 CRHR2Q13324 411 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 PLD1Q13393 1074 aa6.56□□□□□ -1.36
HMG20A-201ENST00000336216 PRKD1Q15139 912 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms