RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 STT3AP46977 705 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 KPNA1P52294 538 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 PHEXP78562 749 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 CYS1Q717R9 158 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 FAM156AQ8NDB6 213 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 PPTC7Q8NI37 304 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 C16orf70Q9BSU1 422 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 TRIM17Q9Y577 477 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 CITO14578 2027 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 RLFQ13129 1914 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 DNAJC25-GNG10A0A024R161 153 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 VAPBO95292 243 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 GLUD2P49448 558 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 NAB1Q13506 487 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 LSM12Q3MHD2 195 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 TMEM259Q4ZIN3 620 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 BNC2Q6ZN30 1099 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 FASTKD5Q7L8L6 764 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZNF354CQ86Y25 554 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 WDCPQ9H6R7 721 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 STX16-NPEPL1H3BU86 382 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 XPO1O14980 1071 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 BUD23O43709 281 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 OXSR1O95747 527 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 AP2A1O95782 977 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 MT-CO1P00395 513 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 MPOP05164 745 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 PTPN1P18031 435 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 TFEBP19484 476 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 HARS2P49590 506 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 RPL14P50914 215 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 SV2CQ496J9 727 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 RARS2Q5T160 578 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 ITPRIPL1Q6GPH6 555 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 RNF111Q6ZNA4 994 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 OTOP3Q7RTS5 596 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZNF410Q86VK4 478 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 SLC41A1Q8IVJ1 513 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 GPC2Q8N158 579 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 CRYBG2Q8N1P7 616 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 DGCR14Q96DF8 476 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 DUSP16Q9BY84 665 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 DRC3Q9H069 523 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 Q9H521 79 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 CYP4F12Q9HCS2 524 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 MID2Q9UJV3 735 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 CDYLQ9Y232 598 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 YJEFN3A6XGL0 299 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 NRP1O14786 923 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 HDAC3O15379 428 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 NUMBP49757 651 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 DGKDQ16760 1214 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 EPGNQ6UW88 154 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 C16orf89Q6UX73 402 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 PTAR1Q7Z6K3 402 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 DSELQ8IZU8 1212 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 GPRC5AQ8NFJ5 357 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZSCAN18Q8TBC5 510 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 CHST12Q9NRB3 414 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 SPO11Q9Y5K1 396 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 RGSL1A5PLK6 1076 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 PMLP29590 882 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 UTS2BQ765I0 119 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 SPATA22Q8NHS9 363 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZFP42Q96MM3 310 aa16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 EIF2B3Q9NR50 452 aaKnown RBP16.75■□□□□ 0.27
CDC42EP4-201ENST00000335793 PMPCBO75439 489 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 RGS2P41220 211 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 CD300CQ08708 224 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 ANKDD1AQ495B1 522 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 TAPT1Q6NXT6 567 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 LAYNQ6UX15 382 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 OSTM1Q86WC4 334 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 PQLC1Q8N2U9 271 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 BHLHE22Q8NFJ8 381 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 CASP10Q92851 521 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 RTKNQ9BST9 563 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 DDX43Q9NXZ2 648 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 IGSF9Q9P2J2 1179 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 OR12D3Q9UGF7 316 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZNF487B1APH4 448 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 VILLO15195 856 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 GPC4O75487 556 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 LILRA4P59901 499 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 SOX4Q06945 474 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 TKTL2Q9H0I9 626 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 RCOR3Q9P2K3 495 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 RGPD3A6NKT7 1758 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 RGPD4Q7Z3J3 1758 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 FBP2O00757 339 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 PRKCGP05129 697 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 THOP1P52888 689 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 CYTH1Q15438 398 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 ANO4Q32M45 955 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 PAN2Q504Q3 1202 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 PATL1Q86TB9 770 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 DENND6AQ8IWF6 608 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 PCDH20Q8N6Y1 951 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 CDCA5Q96FF9 252 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms