RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SLC38A2Q96QD8 506 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 EXD2Q9NVH0 621 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 KBTBD4Q9NVX7 518 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 EGFL7Q9UHF1 273 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 A0A087WZ62 844 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 STX16-NPEPL1H3BU86 382 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 STX16O14662 325 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 TSPAN3O60637 253 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF432O94892 652 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 CCNE2O96020 404 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 F9P00740 461 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 CYP1A1P04798 512 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 THRBP10828 461 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 CHRNA5P30532 468 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 TPTEP56180 551 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 RALGDSQ12967 914 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 TUBA3CQ13748 450 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 PDPRQ8NCN5 879 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 SLITRK1Q96PX8 696 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 RACGAP1Q9H0H5 632 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 ALG9Q9H6U8 611 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 OR5F1O95221 314 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 CHKAP35790 457 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 VBP1P61758 197 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 CYP24A1Q07973 514 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 EFR3AQ14156 821 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 MIB1Q86YT6 1006 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 EIF1ADQ8N9N8 165 aaKnown RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 TMEM176AQ96HP8 235 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 CISHQ9NSE2 258 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 RAB26Q9ULW5 256 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 ODC1P11926 461 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 AMPD1P23109 780 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 MAGEA2P43356 314 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 ARHGDIBP52566 201 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 BCAT1P54687 386 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 SMIM5Q71RC9 77 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 TRPV3Q8NET8 790 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 KIAA1257Q9ULG3 409 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 PRPF19Q9UMS4 504 aaKnown RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 A0A0G2JPF8 293 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 NOTOA8MTQ0 251 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 HNRNPCL3B7ZW38 293 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 GNB5O14775 395 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 MDM4O15151 490 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 PGRMC2O15173 223 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 HNRNPCL4P0DMR1 293 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 MSX2P35548 267 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 HMGCS2P54868 508 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 RHOAP61586 193 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 BTN3A2P78410 334 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 PTCHD4Q6ZW05 846 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 GPSM1Q86YR5 675 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 STARD8Q92502 1023 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 NXNL1Q96CM4 212 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 HAVCR1Q96D42 359 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 NPAS2Q99743 824 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 SLCO1B3Q9NPD5 702 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 GNPTGQ9UJJ9 305 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 GNEQ9Y223 722 aaKnown RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 SAMHD1Q9Y3Z3 626 aaKnown RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 NLRP1Q9C000 1473 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 A0A0B4J269 797 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 GSC2O15499 205 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 LYPLA1O75608 230 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 ATF6P18850 670 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 CCR1P32246 355 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 PPP1R15BQ5SWA1 713 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 LCN1P1Q5VSP4 162 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 RPTNQ6XPR3 784 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 MSL3Q8N5Y2 521 aaKnown RBP9.91□□□□□ -0.82
COL4A6-201ENST00000334504 KCND1Q9NSA2 647 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 ETNK2Q9NVF9 386 aa9.91□□□□□ -0.82
COL4A6-201ENST00000334504 SAGE2PA6NJ88 616 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 WWP2O00308 870 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 NCAM2O15394 837 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 NRP2O60462 931 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 NTRK1P04629 796 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 PFKFB4Q16877 469 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 CNPY1Q3B7I2 92 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 PHACTR4Q8IZ21 702 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 ADCY4Q8NFM4 1077 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 ZC3H10Q96K80 434 aaKnown RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 GFM1Q96RP9 751 aaKnown RBP9.9□□□□□ -0.82
COL4A6-201ENST00000334504 BTRCQ9Y297 605 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 CRYL1Q9Y2S2 319 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 PCDHGA4Q9Y5G9 962 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 FADS3Q9Y5Q0 445 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 METTL18O95568 372 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 NR4A1P22736 598 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 PDHA2P29803 388 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 UGT2B15P54855 530 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 RTP1P59025 263 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 NOTUMQ6P988 496 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 PIH1D2Q8WWB5 315 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 BAP1Q92560 729 aa9.9□□□□□ -0.82
COL4A6-201ENST00000334504 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms