RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ABHD8Q96I13 439 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 CNDP1Q96KN2 507 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 DPY30Q9C005 99 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 ZNHIT2Q9UHR6 403 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 REXO2Q9Y3B8 237 aaKnown RBP15.19■□□□□ 0.02
C9orf47-201ENST00000334490 CPQQ9Y646 472 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 ACSL4O60488 711 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 APODP05090 189 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 FGF1P05230 155 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 WASP42768 502 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 C16orf46Q6P387 395 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 ZNF296Q8WUU4 475 aaPredicted RBP15.19■□□□□ 0.02
C9orf47-201ENST00000334490 B3GALT6Q96L58 329 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 CHKBQ9Y259 395 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 CCDC166P0CW27 439 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 NKAPQ8N5F7 415 aaKnown RBP15.19■□□□□ 0.02
C9orf47-201ENST00000334490 ALG9Q9H6U8 611 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 GLOD4Q9HC38 313 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 CACNG4Q9UBN1 327 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 INSL6Q9Y581 213 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 E9PAM4 449 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 SLC10A3P09131 477 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 HPGDP15428 266 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 TNNI3P19429 210 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 HLA-DPA1P20036 260 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 RABGGTBP53611 331 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 GBE1Q04446 702 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 CYTH1Q15438 398 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 CYP2A13Q16696 494 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 GRAMD4Q6IC98 578 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 MIER2Q8N344 545 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 FNDC5Q8NAU1 212 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 STAG3L4Q8TBR4 150 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 STK32AQ8WU08 396 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 MAN1C1Q9NR34 630 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.19■□□□□ 0.02
C9orf47-201ENST00000334490 GNPTGQ9UJJ9 305 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3DA0A087WVF3 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3IA0A087WXS9 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3EA0A087X179 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3KA0A087X1G2 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3FA6NER0 549 aaPredicted RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3LB9A6J9 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 SEC22BO75396 215 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 ELFN1P0C7U0 828 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3HP0C7X1 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 RHOQP17081 205 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3GQ6DHY5 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3CQ6IPX1 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 ZCCHC23Q6ZST2 131 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 MTDHQ86UE4 582 aaKnown RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TAC4Q86UU9 113 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TBC1D3Q8IZP1 549 aaPredicted RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 AENQ8WTP8 325 aaKnown RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 HDAC10Q969S8 669 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 HGH1Q9BTY7 390 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 RNF186Q9NXI6 227 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 GPSM3Q9Y4H4 160 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 ABHD14A-ACY1A0A1B0GW23 586 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TPP1O14773 563 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 PAPSS1O43252 624 aaPredicted RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 ANXA5P08758 320 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 CDK7P50613 346 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 PRKAA2P54646 552 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 POLE2P56282 527 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 YBEYP58557 167 aaPredicted RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 DAOAP59103 153 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TAF5Q15542 800 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 EBNA1BP2Q99848 306 aaKnown RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 THAP1Q9NVV9 213 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 GOLGA4Q13439 2230 aaKnown RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 A0A1W2PQ45 241 aaPredicted RBP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 A0A1W2PQY0 241 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 AGRPO00253 132 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 AMD1P17707 334 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 PIK3CGP48736 1102 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 IRF8Q02556 426 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 RASA2Q15283 850 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 PFKFB4Q16877 469 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 SOWAHAQ2M3V2 549 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 PARP15Q460N3 678 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TEX44Q53QW1 395 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 GALNT4Q8N4A0 578 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 FUBP3Q96I24 572 aaKnown RBP eCLIP15.18■□□□□ 0.02
C9orf47-201ENST00000334490 POMKQ9H5K3 350 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TRPC4Q9UBN4 977 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 FBXO5Q9UKT4 447 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 ADGRA3Q8IWK6 1321 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 A0A087X1B8 175 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 ZNF839A8K0R7 811 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 BANF1O75531 89 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 PIGRP01833 764 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 UGT2B4P06133 528 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 PEX5P50542 639 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 CNKSR3Q6P9H4 555 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 TMC5Q6UXY8 1006 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 MAGED4Q96JG8 741 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 NDNQ99608 321 aa15.18■□□□□ 0.02
C9orf47-201ENST00000334490 NLNQ9BYT8 704 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms