RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 MFSD6LQ8IWD5 586 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 SH3TC2Q8TF17 1288 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 KCTD4Q8WVF5 259 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 SLC39A13Q96H72 371 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 GATA5Q9BWX5 397 aaPredicted RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 SHCBP1LQ9BZQ2 653 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 STN1Q9H668 368 aaKnown RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 MAN1C1Q9NR34 630 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 SQORQ9Y6N5 450 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 CASP8AP2Q9UKL3 1982 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 J3KR12 359 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 TRIM13O60858 407 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 SBK3P0C264 359 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 ALOX15P16050 662 aaPredicted RBP15.06■□□□□ 0
CLCNKA-201ENST00000331433 ELF1P32519 619 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 SLC1A2P43004 574 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 CCR10P46092 362 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 ERFP50548 548 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 TBX4P57082 545 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 MAXP61244 160 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 PSMD5Q16401 504 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 FNDC1Q4ZHG4 1894 aaPredicted RBP15.06■□□□□ 0
CLCNKA-201ENST00000331433 ALFQ53S48 1182 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 MIB1Q86YT6 1006 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 SPNS2Q8IVW8 549 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 SPATA6LQ8N4H0 392 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 TMEM151AQ8N4L1 468 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 SLC25A41Q8N5S1 370 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 HMCESQ96FZ2 354 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 KLHL5Q96PQ7 755 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 FAM193BQ96PV7 902 aaPredicted RBP15.06■□□□□ 0
CLCNKA-201ENST00000331433 THTPAQ9BU02 230 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 COG4Q9H9E3 785 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 ENTPD7Q9NQZ7 604 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 NSMCE4AQ9NXX6 385 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 DOCK4Q8N1I0 1966 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 PEX11BO96011 259 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 CHRNGP07510 517 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 HAPLN1P10915 354 aaPredicted RBP15.06■□□□□ 0
CLCNKA-201ENST00000331433 WNT3AP56704 352 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 THOC5Q13769 683 aaKnown RBP15.06■□□□□ 0
CLCNKA-201ENST00000331433 NFE2Q16621 373 aaPredicted RBP15.06■□□□□ 0
CLCNKA-201ENST00000331433 MS4A13Q5J8X5 152 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 POTEHQ6S545 545 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 RANBP10Q6VN20 620 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 CEP97Q8IW35 865 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 CNTN4Q8IWV2 1026 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 CENPLQ8N0S6 344 aaPredicted RBP15.06■□□□□ 0
CLCNKA-201ENST00000331433 ARHGAP24Q8N264 748 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 FUBP3Q96I24 572 aaKnown RBP eCLIP15.06■□□□□ 0
CLCNKA-201ENST00000331433 SCYL1Q96KG9 808 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 C8orf48Q96LL4 319 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 GLT1D1Q96MS3 346 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 NT5MQ9NPB1 228 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 OXSMQ9NWU1 459 aa15.06■□□□□ 0
CLCNKA-201ENST00000331433 TTC24A2A3L6 582 aaPredicted RBP15.05■□□□□ 0
CLCNKA-201ENST00000331433 TMEM189-UBE2V1I3L0A0 370 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 MAGEC1O60732 1142 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 LMNAP02545 664 aaKnown RBP15.05■□□□□ 0
CLCNKA-201ENST00000331433 HMBSP08397 361 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 NCF2P19878 526 aaPredicted RBP15.05■□□□□ 0
CLCNKA-201ENST00000331433 HADHAP40939 763 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 ITKQ08881 620 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 CTXN3Q4LDR2 81 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 ZNF470Q6ECI4 717 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 ULK2Q8IYT8 1036 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 ZNF683Q8IZ20 524 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 KIRREL3Q8IZU9 778 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 MAPK15Q8TD08 544 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 DTX3LQ8TDB6 740 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 PABPC5Q96DU9 382 aaKnown RBP15.05■□□□□ 0
CLCNKA-201ENST00000331433 C1orf74Q96LT6 269 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 CDH19Q9H159 772 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 FBXO44Q9H4M3 255 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 HCSTQ9UBK5 93 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 SORCS3Q9UPU3 1222 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 RUVBL2Q9Y230 463 aaKnown RBP15.05■□□□□ 0
CLCNKA-201ENST00000331433 SLC27A5Q9Y2P5 690 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 PCDHB5Q9Y5E4 795 aa15.05■□□□□ 0
CLCNKA-201ENST00000331433 FAM95CA0A1B0GW59 222 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 AURKAO14965 403 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 CABYRO75952 493 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 RAP1GDS1P52306 607 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 FAM189BP81408 668 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 SLC25A3Q00325 362 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 NRG1Q02297 640 aaPredicted RBP15.05■□□□□ -0
CLCNKA-201ENST00000331433 SLC10A7Q0GE19 358 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 SLC9B1Q4ZJI4 515 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 CFAP157Q5JU67 520 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 FAM171A1Q5VUB5 890 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 MSANTD2Q6P1R3 559 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 ZNF354CQ86Y25 554 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 SCUBE1Q8IWY4 988 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 PNPLA1Q8N8W4 532 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 TDRD5Q8NAT2 981 aaKnown RBP15.05■□□□□ -0
CLCNKA-201ENST00000331433 SHKBP1Q8TBC3 707 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 TREX1Q9NSU2 369 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 CDY1Q9Y6F8 540 aa15.05■□□□□ -0
CLCNKA-201ENST00000331433 MIA3Q5JRA6 1907 aa15.04■□□□□ -0
CLCNKA-201ENST00000331433 WASH4PA8MWX3 477 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms