RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 TUBD1Q9UJT1 453 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CDC23Q9UJX2 597 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 DMTF1Q9Y222 760 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 VPS9D1Q9Y2B5 631 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ARL2BPQ9Y2Y0 163 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 A0A0J9YVX5 310 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 TRIM38O00635 465 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CIB2O75838 187 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 MYO1DO94832 1006 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 MBD4O95243 580 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 STAU1O95793 577 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 PGK2P07205 417 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 RAC2P15153 192 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 GCSHP23434 173 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 HOXA13P31271 388 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 HIBADHP31937 336 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 PPP1R2P41236 205 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ALDH3A2P51648 485 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 MYBPC1Q00872 1141 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 MLLT1Q03111 559 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 TRAP1Q12931 704 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 SLC14A1Q13336 389 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 RPE65Q16518 533 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 TRIM16LQ309B1 348 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 VWA3BQ502W6 1294 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 LMBRD2Q68DH5 695 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 SDE2Q6IQ49 451 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ALKBH2Q6NS38 261 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 NANOGNBQ7Z5D8 188 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 RHOT1Q8IXI2 618 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 GALNT4Q8N4A0 578 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ZBTB8BQ8NAP8 495 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 MTMR14Q8NCE2 650 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 FAM13CQ8NE31 585 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 EPS8L3Q8TE67 593 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 GANCQ8TET4 914 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 UPF1Q92900 1129 aaKnown RBP eCLIP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ERP27Q96DN0 273 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 THAP11Q96EK4 314 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 PYM1Q9BRP8 204 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 TMEM121Q9BTD3 319 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 EXO5Q9H790 373 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 LRRC40Q9H9A6 602 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ZDHHC7Q9NXF8 308 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 TAS2R1Q9NYW7 299 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 KLHL3Q9UH77 587 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 HACL1Q9UJ83 578 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 PPIEQ9UNP9 301 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ARIH1Q9Y4X5 557 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 UBIAD1Q9Y5Z9 338 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ZNF318Q5VUA4 2279 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 GTPBP10A4D1E9 387 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 FOXN3O00409 490 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CASC3O15234 703 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 SHOXO15266 292 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 TIPRLO75663 272 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 UCHL3P15374 230 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 PTPN1P18031 435 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 HOXA7P31268 230 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 VAV2P52735 878 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CAV3P56539 151 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 FCHO2Q0JRZ9 810 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 DCTN2Q13561 401 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 SLC14A2Q15849 920 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 AGKQ53H12 422 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 RUNDC3AQ59EK9 446 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 HERC4Q5GLZ8 1057 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 TOR1AIP1Q5JTV8 583 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CEP78Q5JTW2 689 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 EXOSC6Q5RKV6 272 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 UBXN11Q5T124 520 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 RNASEH2BQ5TBB1 312 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 DENND1BQ6P3S1 775 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 NHLRC1Q6VVB1 395 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CCDC149Q6ZUS6 474 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 RFX8Q6ZV50 586 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 UBE2R2Q712K3 238 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CYFIP1Q7L576 1253 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CNNM3Q8NE01 707 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 SERAC1Q96JX3 654 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CBWD1Q9BRT8 395 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 SLC40A1Q9NP59 571 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 UBE2TQ9NPD8 197 aaPredicted RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 DNAJC17Q9NVM6 304 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 PI4KBQ9UBF8 816 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 RSL24D1Q9UHA3 163 aaKnown RBP2.64□□□□□ -1.99
RGPD6-201ENST00000329516 PCYOX1Q9UHG3 505 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ASF1AQ9Y294 204 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 NOX1Q9Y5S8 564 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 NOTCH1P46531 2555 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 CACNA1EQ15878 2313 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ABCA7Q8IZY2 2146 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 FAT1Q14517 4588 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 PRAMEF27A3QJZ7 478 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 ZMPSTE24O75844 475 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 NEBLO76041 1014 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 NR3C2P08235 984 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 MMP10P09238 476 aa2.64□□□□□ -1.99
RGPD6-201ENST00000329516 GZMAP12544 262 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms