RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SH2D5Q6ZV89 423 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 HAUS6Q7Z4H7 955 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 HID1Q8IV36 788 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 KATNAL2Q8IYT4 538 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 PARP8Q8N3A8 854 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 FNIP1Q8TF40 1166 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 TFAP2CQ92754 450 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 HSD17B14Q9BPX1 270 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 SLC4A5Q9BY07 1137 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 TRPV6Q9H1D0 765 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 ADNPQ9H2P0 1102 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 KCNN2Q9H2S1 579 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 TOR4AQ9NXH8 423 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 MTRRQ9UBK8 725 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 CPSF3Q9UKF6 684 aaKnown RBP12.02□□□□□ -0.49
SHMT2-201ENST00000328923 HCN4Q9Y3Q4 1203 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 PCDHGA10Q9Y5H3 936 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 TRIM64A6NGJ6 449 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 PIK3R2O00459 728 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 MEIS2O14770 477 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 LYPLA1O75608 230 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 CLIC3O95833 236 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 FDX1P10109 184 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 RALAP11233 206 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 PIK3R1P27986 724 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 KRT20P35900 424 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 GJC1P36383 396 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 HAAOP46952 286 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 ALDH7A1P49419 539 aaKnown RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 NUDT2P50583 147 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 EIF6P56537 245 aaKnown RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 SLC18A2Q05940 514 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 PPP3CAQ08209 521 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 FAAP100Q0VG06 881 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 AQP6Q13520 282 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 SELPLGQ14242 412 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 Q5BKY6 102 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 FSCBQ5H9T9 825 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 ZNF600Q6ZNG1 722 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 METTL3Q86U44 580 aaKnown RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 SLC47A2Q86VL8 602 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 ANKRD53Q8N9V6 530 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 CMASQ8NFW8 434 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 EFHD1Q9BUP0 239 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 SMOXQ9NWM0 555 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 PAQR5Q9NXK6 330 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 PKD2L2Q9NZM6 624 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 RIMKLBQ9ULI2 386 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 TMCC3Q9ULS5 477 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 TCAF1Q9Y4C2 921 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 SIPA1L1O43166 1804 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 COPEO14579 308 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 RAD51BO15315 384 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 MSH4O15457 936 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 DCXO43602 365 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 SNNO75324 88 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 CKMT2P17540 419 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 RBL1P28749 1068 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 COX10Q12887 443 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 CEP55Q53EZ4 464 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 TTBK2Q6IQ55 1244 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 KIAA1841Q6NSI8 718 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 CLEC10AQ8IUN9 316 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 LGI2Q8N0V4 545 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 OR10Z1Q8NGY1 313 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 DMRTB1Q96MA1 342 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 KREMEN1Q96MU8 473 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 GPN2Q9H9Y4 310 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 RPRD1BQ9NQG5 326 aaKnown RBP12.01□□□□□ -0.49
SHMT2-201ENST00000328923 ACTR3BQ9P1U1 418 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 SLCO3A1Q9UIG8 710 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 RIPK3Q9Y572 518 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
SHMT2-201ENST00000328923 LINC01387J3KSC0 135 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 CFLARO15519 480 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 TCN1P20061 433 aaPredicted RBP12□□□□□ -0.49
SHMT2-201ENST00000328923 SERPINB5P36952 375 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 CEACAM7Q14002 265 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 PON2Q15165 354 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 VWA5B1Q5TIE3 1220 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 MAVSQ7Z434 540 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 RHOT1Q8IXI2 618 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 FAM156AQ8NDB6 213 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 GRPEL2Q8TAA5 225 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 DDX1Q92499 740 aaKnown RBP12□□□□□ -0.49
SHMT2-201ENST00000328923 HDAC11Q96DB2 347 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 MARK4Q96L34 752 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 SERPINI1Q99574 410 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 SLC13A1Q9BZW2 595 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 ACSS3Q9H6R3 686 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12□□□□□ -0.49
SHMT2-201ENST00000328923 PCSK1NQ9UHG2 260 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 PCDHGA7Q9Y5G6 932 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 A8MV72 311 aaPredicted RBP12□□□□□ -0.49
SHMT2-201ENST00000328923 FAM86B1E9PN63 330 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 SOCS2O14508 198 aa12□□□□□ -0.49
SHMT2-201ENST00000328923 DEAF1O75398 565 aaPredicted RBP12□□□□□ -0.49
SHMT2-201ENST00000328923 TOMM70O94826 608 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms