RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 SLC9A4Q6AI14 798 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 MFSD7Q6UXD7 560 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 LPCAT2Q7L5N7 544 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 RNF10Q8N5U6 811 aaKnown RBP17.13■□□□□ 0.33
CLDN6-201ENST00000328796 AADATQ8N5Z0 425 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 PLD5Q8N7P1 536 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 ANP32BQ92688 251 aaKnown RBP17.13■□□□□ 0.33
CLDN6-201ENST00000328796 KRT35Q92764 455 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 FAM131CQ96AQ9 280 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 RNF25Q96BH1 459 aaPredicted RBP17.13■□□□□ 0.33
CLDN6-201ENST00000328796 ZNF599Q96NL3 588 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 HEPHQ9BQS7 1158 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 TM6SF2Q9BZW4 377 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 TSGA10Q9BZW7 698 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 FBXL12Q9NXK8 326 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 LHX3Q9UBR4 397 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 SERGEFQ9UGK8 458 aa17.13■□□□□ 0.33
CLDN6-201ENST00000328796 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
CLDN6-201ENST00000328796 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 KRT86O43790 486 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 EPN2O95208 641 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 RETP07949 1114 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 CCDC175P0C221 793 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 CTNNA2P26232 953 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 DRD3P35462 400 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 CDKN2BP42772 138 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 DNA2P51530 1060 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 METAP1P53582 386 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 RHOAP61586 193 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 SNRPD1P62314 119 aaKnown RBP17.12■□□□□ 0.33
CLDN6-201ENST00000328796 RPL6Q02878 288 aaKnown RBP17.12■□□□□ 0.33
CLDN6-201ENST00000328796 RFTN1Q14699 578 aaPredicted RBP17.12■□□□□ 0.33
CLDN6-201ENST00000328796 ZNF662Q6ZS27 426 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 FAM124AQ86V42 546 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 TMEFF1Q8IYR6 380 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 ATPAF2Q8N5M1 289 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 EXD1Q8NHP7 514 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 RUBCNQ92622 972 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 VOPP1Q96AW1 172 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 GDAP1L1Q96MZ0 367 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 IL36AQ9UHA7 158 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 FZD4Q9ULV1 537 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 NCKAP1Q9Y2A7 1128 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 PCDHA3Q9Y5H8 950 aa17.12■□□□□ 0.33
CLDN6-201ENST00000328796 A0A1W2PP55 124 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 GFRA3O60609 400 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 NDUFS2O75306 463 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 LEFTY1O75610 366 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 PALMO75781 387 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 ZRANB2O95218 330 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLDN6-201ENST00000328796 PEX11BO96011 259 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 ACSL1P33121 698 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 GARSP41250 739 aaKnown RBP17.11■□□□□ 0.33
CLDN6-201ENST00000328796 GBE1Q04446 702 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 MYLK3Q32MK0 819 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 ODF2Q5BJF6 829 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 ATXN7L2Q5T6C5 722 aaPredicted RBP17.11■□□□□ 0.33
CLDN6-201ENST00000328796 TMCO4Q5TGY1 634 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 SPOCD1Q6ZMY3 1216 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 NT5DC3Q86UY8 548 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 RCOR2Q8IZ40 523 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 SYCE1Q8N0S2 351 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 HDDC3Q8N4P3 179 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 GRIN3AQ8TCU5 1115 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 ZNF419Q96HQ0 510 aaPredicted RBP17.11■□□□□ 0.33
CLDN6-201ENST00000328796 LRIG1Q96JA1 1093 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 OMDQ99983 421 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 BTBD1Q9H0C5 482 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 PCED1AQ9H1Q7 454 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 SGK2Q9HBY8 427 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 DTLQ9NZJ0 730 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 GMEB2Q9UKD1 530 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 CAPN6Q9Y6Q1 641 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 CACNA1EQ15878 2313 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 USP34Q70CQ2 3546 aa17.11■□□□□ 0.33
CLDN6-201ENST00000328796 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 RNF103O00237 685 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 KPNA3O00505 521 aaPredicted RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 APOL1O14791 398 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 RNASEH2AO75792 299 aaKnown RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 POP4O95707 220 aaKnown RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 IGSF6O95976 241 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 ZFXP17010 805 aaPredicted RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 PTGER3P43115 390 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 DHPSP49366 369 aaPredicted RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 PEX5P50542 639 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 ARSIQ5FYB1 569 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 SLC41A1Q8IVJ1 513 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 CADM4Q8NFZ8 388 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 GANCQ8TET4 914 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 FATE1Q969F0 183 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 ARRDC3Q96B67 414 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 RBM41Q96IZ5 413 aaKnown RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 TSGA13Q96PP4 275 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 MAK16Q9BXY0 300 aaKnown RBP17.1■□□□□ 0.33
CLDN6-201ENST00000328796 NEUROG2Q9H2A3 272 aa17.1■□□□□ 0.33
CLDN6-201ENST00000328796 NCDNQ9UBB6 729 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms