RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 PABPC4LP0CB38 370 aaKnown RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 GRIA4P48058 902 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 SH3BGRP55822 239 aaPredicted RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 LSM12Q3MHD2 195 aaKnown RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 DCLRE1AQ6PJP8 1040 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 SMG8Q8ND04 991 aaKnown RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 ICA1LQ8NDH6 482 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 PPP1R2P1Q96PQ5 205 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 PPP1R10Q96QC0 940 aaKnown RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 EPB41L1Q9H4G0 881 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 AAR2Q9Y312 384 aaKnown RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 GOLGA8QA0A0J9YX86 632 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 GOLGA8OA6NCC3 632 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 GOLGA8NF8WBI6 632 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 SRGAP2BP0DMP2 458 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 FLT3LGP49771 235 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 CYLC2Q14093 348 aaPredicted RBP20.17■□□□□ 0.82
SOX2-201ENST00000325404 MMEL1Q495T6 779 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 PTCD2Q8WV60 388 aaKnown RBP20.17■□□□□ 0.82
SOX2-201ENST00000325404 IRGQQ8WZA9 623 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 CRTAC1Q9NQ79 661 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 DDIT4Q9NX09 232 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 ZNF638Q14966 1978 aaKnown RBP20.17■□□□□ 0.82
SOX2-201ENST00000325404 MYADML2A6NDP7 307 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 MPSTP25325 297 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 NMBRP28336 390 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 HOXC8P31273 242 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 SERPINB5P36952 375 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 SMAD1Q15797 465 aaKnown RBP20.17■□□□□ 0.82
SOX2-201ENST00000325404 PIGGQ5H8A4 983 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 ARL13AQ5H913 290 aaPredicted RBP20.17■□□□□ 0.82
SOX2-201ENST00000325404 PCID2Q5JVF3 399 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 GNASQ5JWF2 1037 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 SH2D4BQ5SQS7 431 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 KIAA0319Q5VV43 1072 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 DSELQ8IZU8 1212 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 PGAM4Q8N0Y7 254 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 TMEM40Q8WWA1 233 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 SMOQ99835 787 aa20.17■□□□□ 0.82
SOX2-201ENST00000325404 DMAP1Q9NPF5 467 aaPredicted RBP20.17■□□□□ 0.82
SOX2-201ENST00000325404 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.17■□□□□ 0.82
SOX2-201ENST00000325404 PIGNO95427 931 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 CYP2C18P33260 490 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 ALDH1A3P47895 512 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 CRYBB1P53674 252 aaPredicted RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 NSUN2Q08J23 767 aaKnown RBP eCLIP20.16■□□□□ 0.82
SOX2-201ENST00000325404 DYNC1I2Q13409 638 aaKnown RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 PKN3Q6P5Z2 889 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 BNC2Q6ZN30 1099 aaPredicted RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 FAM35AQ86V20 835 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 SNX32Q86XE0 403 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 MARVELD2Q8N4S9 558 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 CNTD1Q8N815 330 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 DLG3Q92796 817 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 PGLYRP2Q96PD5 576 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 MRM3Q9HC36 420 aaKnown RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 CPSF2Q9P2I0 782 aaKnown RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 CDYLQ9Y232 598 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 COL4A4P53420 1690 aaPredicted RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 NPHS1O60500 1241 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 AP1G2O75843 785 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 ZMPSTE24O75844 475 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 CHRNGP07510 517 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 SLC35E2BP0CK96 405 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 NCAM1P13591 858 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 NUDT2P50583 147 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 CHN2P52757 468 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 USP10Q14694 798 aaKnown RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 ZNF423Q2M1K9 1284 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 TMC7Q7Z402 723 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 SCML4Q8N228 414 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 ARRDC4Q8NCT1 418 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 ACVR1CQ8NER5 493 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 MTG1Q9BT17 334 aaPredicted RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 OSBPL2Q9H1P3 480 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 Q9H521 79 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 WDCPQ9H6R7 721 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 SPC25Q9HBM1 224 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 SLC38A7Q9NVC3 462 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 OR12D3Q9UGF7 316 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 DTNAQ9Y4J8 743 aa20.16■□□□□ 0.82
SOX2-201ENST00000325404 FNDC1Q4ZHG4 1894 aaPredicted RBP20.16■□□□□ 0.82
SOX2-201ENST00000325404 SMIM31A0A1B0GVY4 71 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 PTGESO14684 152 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 CAPNS1P04632 268 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 POLE2P56282 527 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 PEX6Q13608 980 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 PDK3Q15120 406 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 UGT2A3Q6UWM9 527 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 RUVBL2Q9Y230 463 aaKnown RBP20.15■□□□□ 0.82
SOX2-201ENST00000325404 ACOT9Q9Y305 439 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 JCHAINP01591 159 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 CCNCP24863 283 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 GSTT1P30711 240 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 HTR7P34969 479 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 DLG1Q12959 904 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 ITGA7Q13683 1181 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 CNPY1Q3B7I2 92 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 RASIP1Q5U651 963 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms