RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 PTPN9P43378 593 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 NSUN2Q08J23 767 aaKnown RBP eCLIP16.79■□□□□ 0.28
PDE1C-201ENST00000321453 GALNT2Q10471 571 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 DUOXA2Q1HG44 320 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 DHFR2Q86XF0 187 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 CPSF7Q8N684 471 aaKnown RBP16.79■□□□□ 0.28
PDE1C-201ENST00000321453 TNIP2Q8NFZ5 429 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 OR52K1Q8NGK4 314 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 HMGCLL1Q8TB92 370 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 KCTD4Q8WVF5 259 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 MCRS1Q96EZ8 462 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 HEXIM2Q96MH2 286 aaKnown RBP16.79■□□□□ 0.28
PDE1C-201ENST00000321453 RBBP8Q99708 897 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 PDCD2LQ9BRP1 358 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 CACNA2D2Q9NY47 1150 aa16.79■□□□□ 0.28
PDE1C-201ENST00000321453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.78■□□□□ 0.28
PDE1C-201ENST00000321453 H0YJX3 145 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 EI24O14681 340 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 ICAM1P05362 532 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 RAD23AP54725 363 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 SLFN12LQ6IEE8 588 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 CNTD1Q8N815 330 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 ELOVL4Q9GZR5 314 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 EHD1Q9H4M9 534 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 PDLIM7Q9NR12 457 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 CPQQ9Y646 472 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 STYXL1Q9Y6J8 313 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 ADGRA2Q96PE1 1338 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 MED7O43513 233 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 GCATO75600 419 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 IL18RAPO95256 599 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 CYP3A5P20815 502 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 MYF6P23409 242 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 SEMA5AQ13591 1074 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 ZIK1Q3SY52 487 aaPredicted RBP16.78■□□□□ 0.28
PDE1C-201ENST00000321453 DEPDC1Q5TB30 811 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 NIPA1Q7RTP0 329 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 BRSK2Q8IWQ3 736 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 LSMEM2Q8N112 164 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 PYROXD2Q8N2H3 581 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 TRUB1Q8WWH5 349 aaKnown RBP16.78■□□□□ 0.28
PDE1C-201ENST00000321453 ITPKCQ96DU7 683 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 ALPK1Q96QP1 1244 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 UNC93B1Q9H1C4 597 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 GBA3Q9H227 469 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 NANOGQ9H9S0 305 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 RIC8BQ9NVN3 520 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 ITGB1BP2Q9UKP3 347 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 STRCQ7RTU9 1775 aa16.78■□□□□ 0.28
PDE1C-201ENST00000321453 TCRBV3S1A0A5B6 114 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 FAM155AB1AL88 458 aaPredicted RBP16.77■□□□□ 0.28
PDE1C-201ENST00000321453 ZNF701M0R085 212 aaPredicted RBP16.77■□□□□ 0.28
PDE1C-201ENST00000321453 SNAP91O60641 907 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 EEF1DP29692 281 aaKnown RBP16.77■□□□□ 0.28
PDE1C-201ENST00000321453 CAP2P40123 477 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 TPTEP56180 551 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 KCNC4Q03721 635 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 PTPN11Q06124 597 aaPredicted RBP16.77■□□□□ 0.28
PDE1C-201ENST00000321453 FASTKQ14296 549 aaKnown RBP16.77■□□□□ 0.28
PDE1C-201ENST00000321453 ANO4Q32M45 955 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 PCYOX1LQ8NBM8 494 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 CERKQ8TCT0 537 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 MAGEE2Q8TD90 523 aaPredicted RBP16.77■□□□□ 0.28
PDE1C-201ENST00000321453 ZC3H15Q8WU90 426 aaKnown RBP16.77■□□□□ 0.28
PDE1C-201ENST00000321453 MFSD3Q96ES6 412 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 NSMCE3Q96MG7 304 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 VPS33BQ9H267 617 aa16.77■□□□□ 0.28
PDE1C-201ENST00000321453 TUBA8Q9NY65 449 aaPredicted RBP16.77■□□□□ 0.28
PDE1C-201ENST00000321453 ATP6AP2A0A1C7CYW4 349 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 ATP6AP2O75787 350 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 POLBP06746 335 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 SPRP35270 261 aaPredicted RBP16.77■□□□□ 0.27
PDE1C-201ENST00000321453 WDR49Q8IV35 697 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 CCNYQ8ND76 341 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 ZNF420Q8TAQ5 688 aaPredicted RBP16.77■□□□□ 0.27
PDE1C-201ENST00000321453 GLT1D1Q96MS3 346 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 NACA2Q9H009 215 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 XYLT2Q9H1B5 865 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 UPF3AQ9H1J1 476 aaKnown RBP16.77■□□□□ 0.27
PDE1C-201ENST00000321453 SPAG4Q9NPE6 437 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 WARS2Q9UGM6 360 aaKnown RBP16.77■□□□□ 0.27
PDE1C-201ENST00000321453 SUN2Q9UH99 717 aa16.77■□□□□ 0.27
PDE1C-201ENST00000321453 RUVBL2Q9Y230 463 aaKnown RBP16.77■□□□□ 0.27
PDE1C-201ENST00000321453 NEMP2A6NFY4 417 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 MRASO14807 208 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 TRIM24O15164 1050 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 SBK3P0C264 359 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 CYP2C9P11712 490 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 LRPAP1P30533 357 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 OXTRP30559 389 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 RAB15P59190 212 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 PIGFQ07326 219 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 PRKAA1Q13131 559 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 RFTN1Q14699 578 aaPredicted RBP16.76■□□□□ 0.27
PDE1C-201ENST00000321453 PHKG1Q16816 387 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 GRTP1Q5TC63 336 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 LIPMQ5VYY2 423 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 PRR23BQ6ZRT6 265 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 ERMP1Q7Z2K6 904 aa16.76■□□□□ 0.27
PDE1C-201ENST00000321453 C12orf29Q8N999 325 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms