RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 HMCESQ96FZ2 354 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 HEPHQ9BQS7 1158 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC65-202ENST00000320516 HDAC8Q9BY41 377 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 SLC32A1Q9H598 525 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 LRRC19Q9H756 370 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 PREBQ9HCU5 417 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 MRPL47Q9HD33 250 aaKnown RBP10.11□□□□□ -0.79
CCDC65-202ENST00000320516 MYO1AQ9UBC5 1043 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 PCSK1NQ9UHG2 260 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 WASF3Q9UPY6 502 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC65-202ENST00000320516 ZSCAN5CA6NGD5 496 aaPredicted RBP10.11□□□□□ -0.79
CCDC65-202ENST00000320516 RASA4BC9J798 803 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 RASA4O43374 803 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 SH3BP5O60239 455 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 RNF8O76064 485 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 GSRP00390 522 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 IL1R2P27930 398 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 PCK1P35558 622 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 TPI1P60174 286 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 FAM193AP78312 1265 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 SHC2P98077 582 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 SERINC3Q13530 473 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 ACAP1Q15027 740 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 ZNF423Q2M1K9 1284 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 PARP15Q460N3 678 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 NEK5Q6P3R8 708 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 ERN2Q76MJ5 926 aaKnown RBP10.11□□□□□ -0.79
CCDC65-202ENST00000320516 VPS36Q86VN1 386 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 PSTKQ8IV42 348 aaKnown RBP10.11□□□□□ -0.79
CCDC65-202ENST00000320516 CAMK1GQ96NX5 476 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 KCTD15Q96SI1 283 aaPredicted RBP10.11□□□□□ -0.79
CCDC65-202ENST00000320516 TM6SF2Q9BZW4 377 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 THAP2Q9H0W7 228 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 TSPY26PQ9H489 355 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 DHX35Q9H5Z1 703 aaKnown RBP10.11□□□□□ -0.79
CCDC65-202ENST00000320516 TM7SF3Q9NS93 570 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 HPCAL4Q9UM19 191 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 PCDHGB2Q9Y5G2 931 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 CABIN1Q9Y6J0 2220 aa10.11□□□□□ -0.79
CCDC65-202ENST00000320516 SPEGQ15772 3267 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 EEF2KO00418 725 aaKnown RBP10.1□□□□□ -0.79
CCDC65-202ENST00000320516 KCNK3O14649 394 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 BUB1O43683 1085 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 PRPSAP2O60256 369 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 CBFA2T3O75081 653 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 TMCC1O94876 653 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 CYP1A2P05177 515 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 TPM3P06753 285 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 TCF4P15884 667 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 ITGB7P26010 798 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 CD38P28907 300 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 GKP32189 559 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 NUDT1P36639 197 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 DNA2P51530 1060 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 CCDC15Q0P6D6 951 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 ASTE1Q2TB18 679 aaPredicted RBP10.1□□□□□ -0.79
CCDC65-202ENST00000320516 INO80DQ53TQ3 878 aaPredicted RBP10.1□□□□□ -0.79
CCDC65-202ENST00000320516 AFMIDQ63HM1 303 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 SPECC1LQ69YQ0 1117 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 NAPEPLDQ6IQ20 393 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 ALKBH5Q6P6C2 394 aaKnown RBP10.1□□□□□ -0.79
CCDC65-202ENST00000320516 LEKR1Q6ZMV7 388 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 RFX8Q6ZV50 586 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 PRPF39Q86UA1 669 aaKnown RBP10.1□□□□□ -0.79
CCDC65-202ENST00000320516 NAXDQ8IW45 347 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 NIPA2Q8N8Q9 360 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 OR2AP1Q8NGE2 309 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 CASKIN2Q8WXE0 1202 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 ARHGEF26Q96DR7 871 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 PPP1R16AQ96I34 528 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 LRIG1Q96JA1 1093 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 SERAC1Q96JX3 654 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 DNAJC7Q99615 494 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 NCAPGQ9BPX3 1015 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 PDFQ9HBH1 243 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 DONSONQ9NYP3 566 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 DMTF1Q9Y222 760 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 TMEM131Q92545 1883 aa10.1□□□□□ -0.79
CCDC65-202ENST00000320516 DOCK9Q9BZ29 2069 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 SPAARA0A1B0GVQ0 90 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 H0Y8X5 98 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 CBFA2T2O43439 604 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 RNGTTO60942 597 aaKnown RBP10.09□□□□□ -0.79
CCDC65-202ENST00000320516 ADRB3P13945 408 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 ERCC2P18074 760 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 MAT2AP31153 395 aaKnown RBP10.09□□□□□ -0.79
CCDC65-202ENST00000320516 HCAR3P49019 387 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 NEK3P51956 506 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 ZNF135P52742 658 aaPredicted RBP10.09□□□□□ -0.79
CCDC65-202ENST00000320516 NDST2P52849 883 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 SNRPD1P62314 119 aaKnown RBP10.09□□□□□ -0.79
CCDC65-202ENST00000320516 HNRNPDQ14103 355 aaKnown RBP10.09□□□□□ -0.79
CCDC65-202ENST00000320516 PIGHQ14442 188 aaPredicted RBP10.09□□□□□ -0.79
CCDC65-202ENST00000320516 NFKBIBQ15653 356 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 DPYSL2Q16555 572 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 CCDC122Q5T0U0 273 aa10.09□□□□□ -0.79
CCDC65-202ENST00000320516 PARS2Q7L3T8 475 aaKnown RBP10.09□□□□□ -0.79
CCDC65-202ENST00000320516 ADAT2Q7Z6V5 191 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms