RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 APOL2Q9BQE5 337 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 ERP44Q9BS26 406 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 ANKZF1Q9H8Y5 726 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 ETNK1Q9HBU6 452 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 FBXL21Q9UKT6 434 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 DUSP12Q9UNI6 340 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 PLA2G4CQ9UP65 541 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 SLC27A6Q9Y2P4 619 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 TCRBV7S3A2A0A539 114 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 C5orf60A6NFR6 353 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 E7EVH7 732 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 ATP5BP06576 529 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 DLDP09622 509 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 CD86P42081 329 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 IFI35P80217 286 aaPredicted RBP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 DLG2Q15700 870 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 POM121L1PQ3SYA9 428 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 DGKKQ5KSL6 1271 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 LRRC49Q8IUZ0 686 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 SH2D3CQ8N5H7 860 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 ZNF557Q8N988 423 aaPredicted RBP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 PDCD6IPQ8WUM4 868 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 MAML1Q92585 1016 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 RUNDC3BQ96NL0 473 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 IL12RB2Q99665 862 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 SEMA3CQ99985 751 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 GORASP1Q9BQQ3 440 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 SORCS3Q9UPU3 1222 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 COL4A2P08572 1712 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 PMPCBO75439 489 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 GCATO75600 419 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 GRIA2P42262 883 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 LMAN1P49257 510 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 PLK1P53350 603 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 PFKPQ01813 784 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 HLTFQ14527 1009 aaKnown RBP eCLIP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 ZNF234Q14588 700 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 ANKRD22Q5VYY1 191 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 IZUMO3Q5VZ72 239 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 SERPINA13PQ6UXR4 307 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 CHPFQ8IZ52 775 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 PDCD7Q8N8D1 485 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 GRIN3AQ8TCU5 1115 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 ATXN2LQ8WWM7 1075 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 SLCO2A1Q92959 643 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 RTP4Q96DX8 246 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 MRGPRX3Q96LB0 322 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 POLR3BQ9NW08 1133 aaPredicted RBP15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 PAK5Q9P286 719 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 PRKAG3Q9UGI9 489 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 SEPT3Q9UH03 358 aa15.64■□□□□ 0.09
PDLIM5-202ENST00000318007 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 K7EQS6 105 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 INSIG1O15503 277 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 MTSS1O43312 755 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 OPHN1O60890 802 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 ST8SIA6P61647 398 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 NIPAL4Q0D2K0 466 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 C22orf39Q6P5X5 142 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 KIAA0907Q7Z7F0 614 aaPredicted RBP15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 ZNF513Q8N8E2 541 aaPredicted RBP15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 IPMKQ8NFU5 416 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 CASKIN2Q8WXE0 1202 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 FAM3CQ92520 227 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 DNASE1L2Q92874 299 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 MYO19Q96H55 970 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 OXNAD1Q96HP4 312 aaPredicted RBP15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 NSMCE3Q96MG7 304 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 POLR1EQ9GZS1 481 aaKnown RBP15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 RAB17Q9H0T7 212 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 GBA3Q9H227 469 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 EVLQ9UI08 416 aaPredicted RBP15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 HCN2Q9UL51 889 aa15.63■□□□□ 0.09
PDLIM5-202ENST00000318007 FAM187AA6NFU0 413 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 STK25O00506 426 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 ZNF821O75541 412 aaPredicted RBP15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 PIGNO95427 931 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 NNMTP40261 264 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 GRIA1P42261 906 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 IL12RB1P42701 662 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 CARSP49589 748 aaKnown RBP15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 ITGA8P53708 1063 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 PLTPP55058 493 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 IHHQ14623 411 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 FSTL4Q6MZW2 842 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 RALGPS2Q86X27 583 aaPredicted RBP15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 GJD3Q8N144 294 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 SIX5Q8N196 739 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 BBS5Q8N3I7 341 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 PAF1Q8N7H5 531 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 NEUROG2Q9H2A3 272 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 ZDHHC6Q9H6R6 413 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 NOD2Q9HC29 1040 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 GLOD4Q9HC38 313 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 LHX3Q9UBR4 397 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 HS3ST2Q9Y278 367 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 EIF2DP41214 584 aaKnown RBP15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 SULT2A1Q06520 285 aa15.62■□□□□ 0.09
PDLIM5-202ENST00000318007 ZNF33AQ06730 810 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms