RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 DLX3O60479 287 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 TFPTP0C1Z6 253 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ADIGQ0VDE8 80 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 USP10Q14694 798 aaKnown RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 ZBTB6Q15916 424 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ANKDD1AQ495B1 522 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 C1QTNF12Q5T7M4 302 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 SYPL2Q5VXT5 272 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 POTEHQ6S545 545 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 CENPLQ8N0S6 344 aaPredicted RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 CRYBG2Q8N1P7 616 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 BBS5Q8N3I7 341 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 TRIML2Q8N7C3 387 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ZBTB8BQ8NAP8 495 aaPredicted RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 KDM1BQ8NB78 822 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 NT5C3BQ969T7 300 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 APBA2Q99767 749 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 COQ10BQ9H8M1 238 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ADA2Q9NZK5 511 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 FAF1Q9UNN5 650 aaPredicted RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 M0QYT0 321 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ERCC2P18074 760 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 TKTP29401 623 aaKnown RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 GNL1P36915 607 aaPredicted RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 GJC2Q5T442 439 aaPredicted RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 LPCAT2Q7L5N7 544 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 BNIPLQ7Z465 357 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 PIGZQ86VD9 579 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 STON2Q8WXE9 905 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ASB9Q96DX5 294 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 PCDHAC1Q9H158 963 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 PIGVQ9NUD9 493 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 EPS15L1Q9UBC2 864 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ANKRD6Q9Y2G4 727 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 SH3GLB1Q9Y371 365 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 PCDHGA7Q9Y5G6 932 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 MCM3APO60318 1980 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 MAGEB16A2A368 324 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 KCNU1A8MYU2 1149 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 TRIM38O00635 465 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 CSPG5O95196 566 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 GABRB3P28472 473 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 NDST2P52849 883 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 PRKAA2P54646 552 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 CDH15P55291 814 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 CPNE9Q8IYJ1 553 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 SPATA6LQ8N4H0 392 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 PCDH20Q8N6Y1 951 aaKnown RBP13.62□□□□□ -0.23
SKA3-202ENST00000314759 LRRC52Q8N7C0 313 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 ZNF513Q8N8E2 541 aaPredicted RBP13.62□□□□□ -0.23
SKA3-202ENST00000314759 RNF169Q8NCN4 708 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 NPY6RQ99463 290 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 CAAP1Q9H8G2 361 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 FAIMQ9NVQ4 179 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 UBP1Q9NZI7 540 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 AP4S1Q9Y587 144 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 TMEM221A6NGB7 291 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 C9IYK1 514 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 TMX2-CTNND1H3BSU7 103 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 ZNF23P17027 643 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 FGFR3P22607 806 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 NDUFV1P49821 464 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 CDK9P50750 372 aaKnown RBP13.62□□□□□ -0.23
SKA3-202ENST00000314759 ZBTB17Q13105 803 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 TRIM25Q14258 630 aaKnown RBP13.62□□□□□ -0.23
SKA3-202ENST00000314759 ZNF460Q14592 562 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 ADRM1Q16186 407 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 ELMSAN1Q6PJG2 1045 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 GK5Q6ZS86 529 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 NPWQ8N729 165 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 CCNYL1Q8N7R7 359 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 LRTOMTQ8WZ04 291 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 MAML3Q96JK9 1138 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 ZNF597Q96LX8 424 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 TSNARE1Q96NA8 513 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 MPHOSPH6Q99547 160 aaKnown RBP13.62□□□□□ -0.23
SKA3-202ENST00000314759 OMDQ99983 421 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 UNKQ9C0B0 810 aaKnown RBP13.62□□□□□ -0.23
SKA3-202ENST00000314759 RHOJQ9H4E5 214 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 ANLNQ9NQW6 1124 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 RRN3Q9NYV6 651 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 XPR1Q9UBH6 696 aa13.62□□□□□ -0.23
SKA3-202ENST00000314759 E7ENX8 843 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 NFKBIEO00221 500 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 DAB1O75553 588 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 CNMDO75829 334 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 HSPA1AP0DMV8 641 aaKnown RBP13.61□□□□□ -0.23
SKA3-202ENST00000314759 HSPA1BP0DMV9 641 aaKnown RBP13.61□□□□□ -0.23
SKA3-202ENST00000314759 HADHAP40939 763 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 NPY2RP49146 381 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 PSME3P61289 254 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 TXNL4AP83876 142 aaKnown RBP13.61□□□□□ -0.23
SKA3-202ENST00000314759 IKBKEQ14164 716 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 C16orf72Q14CZ0 275 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 TSTD2Q5T7W7 516 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 ITPRIPL1Q6GPH6 555 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 LRRC8EQ6NSJ5 796 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 Q6ZNX1 250 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms