RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 UBXN10Q96LJ8 280 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 C7orf26Q96N11 449 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 GBP5Q96PP8 586 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 C10orf88Q9H8K7 445 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 C2orf42Q9NWW7 574 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 IL17BQ9UHF5 180 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 GGT7Q9UJ14 662 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 IPPQ9Y573 584 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 INSL5Q9Y5Q6 135 aa4.28□□□□□ -1.72
POLR2B-201ENST00000314595 ANKRD11Q6UB99 2663 aaPredicted RBP4.28□□□□□ -1.72
POLR2B-201ENST00000314595 CYP3A7-CYP3A51PA0A087WV96 503 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 PRSS51A0A1B0GVH4 220 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 SDR42E2A6NKP2 422 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 TM9SF1O15321 606 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 SCO2O43819 266 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 EXTL3O43909 919 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 PCDHGA12O60330 932 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 CDH16O75309 829 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 TRMUO75648 421 aaKnown RBP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 SFTPCP11686 197 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 PLCG1P19174 1290 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 CYP3A7P24462 503 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 ACVR2AP27037 513 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 HAND2P61296 217 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 CHRNEQ04844 493 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 ASPHQ12797 758 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 PPP2R5CQ13362 524 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 PDK3Q15120 406 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 SLC1A5Q15758 541 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 KYNUQ16719 465 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 ARSHQ5FYA8 562 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 IFIT1BQ5T764 474 aaKnown RBP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 NANOGP8Q6NSW7 305 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 NOTUMQ6P988 496 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 TXNDC11Q6PKC3 985 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 ADGRD1Q6QNK2 874 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 RBM44Q6ZP01 1051 aaKnown RBP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 NLRP9Q7RTR0 991 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 GPR180Q86V85 440 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 CHCHD4Q8N4Q1 142 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 ZCCHC9Q8N567 271 aaKnown RBP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 RFWD2Q8NHY2 731 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 RSPRY1Q96DX4 576 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 ZNF597Q96LX8 424 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 PSTPIP2Q9H939 334 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 STARD5Q9NSY2 213 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 ARHGEF38Q9NXL2 777 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 MAGEC2Q9UBF1 373 aaPredicted RBP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 SLC24A2Q9UI40 661 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 MBD1Q9UIS9 605 aaPredicted RBP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 GNPTGQ9UJJ9 305 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 STRIP2Q9ULQ0 834 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 NDRG2Q9UN36 371 aaKnown RBP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 STK38LQ9Y2H1 464 aa4.28□□□□□ -1.73
POLR2B-201ENST00000314595 FARP1Q9Y4F1 1045 aaPredicted RBP4.28□□□□□ -1.73
POLR2B-201ENST00000314595 DFNA5O60443 496 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 HLA-EP13747 358 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 ETS2P15036 469 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 UCHL3P15374 230 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 CD72P21854 359 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 PROZP22891 400 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 S100A1P23297 94 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 ACAT1P24752 427 aaKnown RBP4.27□□□□□ -1.73
POLR2B-201ENST00000314595 PEX3P56589 373 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 NOP14P78316 857 aaKnown RBP4.27□□□□□ -1.73
POLR2B-201ENST00000314595 IRX4P78413 519 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 NTHL1P78549 312 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 CDR2Q01850 454 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 SMARCB1Q12824 385 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 STX3Q13277 289 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 PTPRNQ16849 979 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 TSR1Q2NL82 804 aaKnown RBP4.27□□□□□ -1.73
POLR2B-201ENST00000314595 ZNF829Q3KNS6 432 aaPredicted RBP4.27□□□□□ -1.73
POLR2B-201ENST00000314595 STXBP5Q5T5C0 1151 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 TCEAL6Q6IPX3 200 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 IZUMO2Q6UXV1 221 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 RIPOR1Q6ZS17 1223 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 MICU3Q86XE3 530 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 ULK2Q8IYT8 1036 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 PPM1KQ8N3J5 372 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 TMEM102Q8N9M5 508 aaPredicted RBP4.27□□□□□ -1.73
POLR2B-201ENST00000314595 ZNF420Q8TAQ5 688 aaPredicted RBP4.27□□□□□ -1.73
POLR2B-201ENST00000314595 SHKBP1Q8TBC3 707 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 HCAR2Q8TDS4 363 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 C2orf15Q8WU43 125 aaKnown RBP4.27□□□□□ -1.73
POLR2B-201ENST00000314595 RAD54LQ92698 747 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 TCEAL3Q969E4 200 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 LENG9Q96B70 501 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 SDCCAG3Q96C92 435 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 BTN2A3PQ96KV6 586 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 SPACA7Q96KW9 195 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 GAD1Q99259 594 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 PSMB7Q99436 277 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 DDX50Q9BQ39 737 aaKnown RBP4.27□□□□□ -1.73
POLR2B-201ENST00000314595 SIKE1Q9BRV8 207 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 BTBD2Q9BX70 525 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 OSBPL8Q9BZF1 889 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 SLC13A1Q9BZW2 595 aa4.27□□□□□ -1.73
POLR2B-201ENST00000314595 NACA2Q9H009 215 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms