RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ZNF354CQ86Y25 554 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 OXR1Q8N573 874 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 EID2Q8N6I1 236 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 OR6K2Q8NGY2 324 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 SAP25Q8TEE9 199 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 NTAN1Q96AB6 310 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 CNDP2Q96KP4 475 aaKnown RBP19.9■□□□□ 0.78
LIME1-201ENST00000309546 HEPHQ9BQS7 1158 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 HDAC8Q9BY41 377 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 ZDHHC6Q9H6R6 413 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 NEU3Q9UQ49 428 aa19.9■□□□□ 0.78
LIME1-201ENST00000309546 TEX33O43247 280 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 RAMP2O60895 175 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 SDC3O75056 442 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 SCAPQ12770 1279 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 BNIP3Q12983 259 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 EFHC2Q5JST6 749 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 CCNI2Q6ZMN8 369 aaPredicted RBP19.89■□□□□ 0.77
LIME1-201ENST00000309546 PYROXD2Q8N2H3 581 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 KLHDC7BQ96G42 594 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 TRPM6Q9BX84 2022 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 ERVMER34-1Q9H9K5 563 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 HPCAL4Q9UM19 191 aa19.89■□□□□ 0.77
LIME1-201ENST00000309546 SRRM3A6NNA2 597 aaPredicted RBP19.88■□□□□ 0.77
LIME1-201ENST00000309546 TMCO5BA8MYB1 307 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 ENC1O14682 589 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 CREB3O43889 395 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 DKK1O94907 266 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 LDOC1O95751 146 aaPredicted RBP19.88■□□□□ 0.77
LIME1-201ENST00000309546 CD160O95971 181 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 THEGLP0DJG4 465 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 ADRB3P13945 408 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 TNFAIP3P21580 790 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 ITGB7P26010 798 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 EPHB2P29323 1055 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 ZNF143P52747 638 aaPredicted RBP19.88■□□□□ 0.77
LIME1-201ENST00000309546 GEMIN4P57678 1058 aaKnown RBP19.88■□□□□ 0.77
LIME1-201ENST00000309546 RPL7AP62424 266 aaKnown RBP19.88■□□□□ 0.77
LIME1-201ENST00000309546 OVGP1Q12889 678 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 POLD3Q15054 466 aaPredicted RBP19.88■□□□□ 0.77
LIME1-201ENST00000309546 ZNF284Q2VY69 593 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 SEL1L3Q68CR1 1132 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 CAVIN1Q6NZI2 390 aaKnown RBP19.88■□□□□ 0.77
LIME1-201ENST00000309546 NEK5Q6P3R8 708 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 FBXL19Q6PCT2 694 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 DCUN1D2Q6PH85 259 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 DHRS13Q6UX07 377 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 TMPRSS7Q7RTY8 843 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 MARCH9Q86YJ5 346 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 MAGEH1Q9H213 219 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 RETREG1Q9H6L5 497 aa19.88■□□□□ 0.77
LIME1-201ENST00000309546 ZFR2Q9UPR6 939 aaKnown RBP19.88■□□□□ 0.77
LIME1-201ENST00000309546 TDRD6O60522 2096 aaKnown RBP19.87■□□□□ 0.77
LIME1-201ENST00000309546 TCRBV5S1A1TA0A578 114 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 SMTNL1A8MU46 457 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 DESP17661 470 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 HNRNPA2B1P22626 353 aaKnown RBP19.87■□□□□ 0.77
LIME1-201ENST00000309546 AKT2P31751 481 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 GKP32189 559 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 RXRGP48443 463 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
LIME1-201ENST00000309546 ACAD10Q6JQN1 1059 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 PARS2Q7L3T8 475 aaKnown RBP19.87■□□□□ 0.77
LIME1-201ENST00000309546 MCOLN2Q8IZK6 566 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 GALNT15Q8N3T1 639 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 TMEM145Q8NBT3 493 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 BPIFA3Q9BQP9 254 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 CALN1Q9BXU9 219 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 TAS2R14Q9NYV8 317 aa19.87■□□□□ 0.77
LIME1-201ENST00000309546 FAM149AA5PLN7 773 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 LRRC53A6NM62 1247 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 KRIT1O00522 736 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 BUB1O43683 1085 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 L1CAMP32004 1257 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 CLDN2P57739 230 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 DNAJC3Q13217 504 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 RTL3Q8N8U3 475 aaKnown RBP19.86■□□□□ 0.77
LIME1-201ENST00000309546 BAP1Q92560 729 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 ISG20Q96AZ6 181 aaKnown RBP19.86■□□□□ 0.77
LIME1-201ENST00000309546 CNPY3Q9BT09 278 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 RTN4Q9NQC3 1192 aaKnown RBP19.86■□□□□ 0.77
LIME1-201ENST00000309546 FZD10Q9ULW2 581 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 WDFY3Q8IZQ1 3526 aa19.86■□□□□ 0.77
LIME1-201ENST00000309546 ATMINO43313 823 aaPredicted RBP19.85■□□□□ 0.77
LIME1-201ENST00000309546 SNRPD1P62314 119 aaKnown RBP19.85■□□□□ 0.77
LIME1-201ENST00000309546 ASIC2Q16515 512 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 FILIP1LQ4L180 1135 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 PPP1R15BQ5SWA1 713 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 ATXN7L2Q5T6C5 722 aaPredicted RBP19.85■□□□□ 0.77
LIME1-201ENST00000309546 IRF2BP2Q7Z5L9 587 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 PTAR1Q7Z6K3 402 aaPredicted RBP19.85■□□□□ 0.77
LIME1-201ENST00000309546 OR13H1Q8NG92 308 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 OR2AP1Q8NGE2 309 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 EPAS1Q99814 870 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 CCDC86Q9H6F5 360 aaKnown RBP19.85■□□□□ 0.77
LIME1-201ENST00000309546 RALYQ9UKM9 306 aaKnown RBP19.85■□□□□ 0.77
LIME1-201ENST00000309546 MYO6Q9UM54 1294 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 FADS3Q9Y5Q0 445 aa19.85■□□□□ 0.77
LIME1-201ENST00000309546 GOLGA4Q13439 2230 aaKnown RBP19.85■□□□□ 0.77
LIME1-201ENST00000309546 CXorf51AA0A1B0GTR3 108 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms