RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ZDHHC17Q8IUH5 632 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 EXT2Q93063 718 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 NXNL1Q96CM4 212 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 CROTQ9UKG9 612 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ARF4P18085 180 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 HMOX2P30519 316 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 LRPAP1P30533 357 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 EPHX2P34913 555 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 BCAT1P54687 386 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 EMP3P54852 163 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 CSE1LP55060 971 aaKnown RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 RHDQ02161 417 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 POU6F1Q14863 301 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 FASTKD5Q7L8L6 764 aaKnown RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 SLC26A9Q7LBE3 791 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 SMYD1Q8NB12 490 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 COPS5Q92905 334 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 UNC93B1Q9H1C4 597 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 SLC8A2Q9UPR5 921 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 TRIP11Q15643 1979 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ACOT8O14734 319 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 PPEF2O14830 753 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 HTRA2O43464 458 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 DLX3O60479 287 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 AP2A1O95782 977 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 JCHAINP01591 159 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ARSAP15289 507 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 NFKB1P19838 968 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ADSLP30566 484 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 SULT2A1Q06520 285 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ITGA7Q13683 1181 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 CSHL1Q14406 222 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 HERC3Q15034 1050 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 NEDD8Q15843 81 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 SIX6OS1Q8N1H7 587 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 CBR4Q8N4T8 237 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 DDHD1Q8NEL9 900 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 SLC2A14Q8TDB8 520 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 C12orf43Q96C57 262 aaKnown RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 PHF21BQ96EK2 531 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 CNOT6Q9ULM6 557 aaKnown RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 STAP1Q9ULZ2 295 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 PLOD2O00469 737 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 XPOTO43592 962 aaKnown RBP11.28□□□□□ -0.6
PTPN7-201ENST00000309017 PGK2P07205 417 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 CYP2C8P10632 490 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 PITX1P78337 314 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-201ENST00000309017 RPS6KA2Q15349 733 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 REP15Q6BDI9 236 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 SLC7A14Q8TBB6 771 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 RDH11Q8TC12 318 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 RNF34Q969K3 372 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 TEPSINQ96N21 525 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 MED10Q9BTT4 135 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 SETD4Q9NVD3 440 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 VPS28Q9UK41 221 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 CDC14AQ9UNH5 594 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 ANKRD6Q9Y2G4 727 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 SLC22A2O15244 555 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 ERCC2P18074 760 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 TSPAN8P19075 237 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 IL10P22301 178 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 MAGEA8P43361 318 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 C21orf59P57076 290 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 PHEXP78562 749 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 SAMD4BQ5PRF9 694 aaKnown RBP11.28□□□□□ -0.6
PTPN7-201ENST00000309017 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-201ENST00000309017 RPS27LQ71UM5 84 aaKnown RBP11.28□□□□□ -0.6
PTPN7-201ENST00000309017 FIBCD1Q8N539 461 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 CHST13Q8NET6 341 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 CANT1Q8WVQ1 401 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 IRGQQ8WZA9 623 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 ZNF597Q96LX8 424 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 PDZD7Q9H5P4 517 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 PFDN4Q9NQP4 134 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 EGFL7Q9UHF1 273 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 HBP1O60381 514 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 CLIC3O95833 236 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 SNRPB2P08579 225 aaKnown RBP11.28□□□□□ -0.6
PTPN7-201ENST00000309017 OCM2P0CE71 109 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 OCMP0CE72 109 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-201ENST00000309017 PTPN3P26045 913 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 PRKAA2P54646 552 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 MPP1Q00013 466 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 DENND6AQ8IWF6 608 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 IPMKQ8NFU5 416 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 OR9I1Q8NGQ6 314 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 KCNN1Q92952 543 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 ISOC1Q96CN7 298 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 RHOJQ9H4E5 214 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 POLR1BQ9H9Y6 1135 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 IGSF9Q9P2J2 1179 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 SUCOQ9UBS9 1254 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms