RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 VPS11Q9H270 941 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 CISHQ9NSE2 258 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 FIS1Q9Y3D6 152 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 TLL2Q9Y6L7 1015 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 DOCK5Q9H7D0 1870 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 UBL4AP11441 157 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 MLLT3P42568 568 aaPredicted RBP10.61□□□□□ -0.71
MSRB3-201ENST00000308259 IGSF11Q5DX21 431 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 SH3PXD2AQ5TCZ1 1133 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 LRRC8EQ6NSJ5 796 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 BNC2Q6ZN30 1099 aaPredicted RBP10.61□□□□□ -0.71
MSRB3-201ENST00000308259 SLC22A16Q86VW1 577 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 HORMAD1Q86X24 394 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 ELMOD1Q8N336 334 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 SOCS4Q8WXH5 440 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 CDK5RAP1Q96SZ6 601 aaKnown RBP10.61□□□□□ -0.71
MSRB3-201ENST00000308259 CIB1Q99828 191 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 KCNK4Q9NYG8 393 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 PCDH10Q9P2E7 1040 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 ZNF221Q9UK13 617 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 PLA2G4CQ9UP65 541 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 COL4A5P29400 1685 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 A0A1B0GTW7 788 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 PDHXO00330 501 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 CLASP2O75122 1294 aaKnown RBP10.61□□□□□ -0.71
MSRB3-201ENST00000308259 TCEA3O75764 348 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 TMEM63AO94886 807 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 CDO1Q16878 200 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 TFDP3Q5H9I0 405 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 CASC4Q6P4E1 433 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 CYP20A1Q6UW02 462 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 PHF13Q86YI8 300 aaPredicted RBP10.61□□□□□ -0.71
MSRB3-201ENST00000308259 KLRG1Q96E93 195 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 EPS8L2Q9H6S3 715 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 GINS2Q9Y248 185 aa10.61□□□□□ -0.71
MSRB3-201ENST00000308259 A8MV72 311 aaPredicted RBP10.6□□□□□ -0.71
MSRB3-201ENST00000308259 CDKN2BP42772 138 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 CYP2R1Q6VVX0 501 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ZNF677Q86XU0 584 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 RFX6Q8HWS3 928 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ZC3H7AQ8IWR0 971 aaKnown RBP10.6□□□□□ -0.71
MSRB3-201ENST00000308259 PGBD4Q96DM1 585 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 MARK4Q96L34 752 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 RUBCNLQ9H714 662 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ZNF395Q9H8N7 513 aaPredicted RBP10.6□□□□□ -0.71
MSRB3-201ENST00000308259 PDLIM7Q9NR12 457 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 FARSBQ9NSD9 589 aaKnown RBP10.6□□□□□ -0.71
MSRB3-201ENST00000308259 CYTH4Q9UIA0 394 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 TRIM49D1C9J1S8 452 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 CLOCKO15516 846 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 HOXC6P09630 235 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 THOP1P52888 689 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 OLR1P78380 273 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 TMEM132BQ14DG7 1078 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 SNX17Q15036 470 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 PXDC1Q5TGL8 231 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ARFGAP1Q8N6T3 406 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 TRPC4APQ8TEL6 797 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 CPT1BQ92523 772 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 CTRCQ99895 268 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 KLC2Q9H0B6 622 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 MAGEE1Q9HCI5 957 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 VPS4AQ9UN37 437 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ERGIC3Q9Y282 383 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 DNAH12Q6ZR08 3092 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 CEP350Q5VT06 3117 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 MEN1O00255 615 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 TM9SF1O15321 606 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 HSPA4LO95757 839 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ALOX12P18054 663 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 RPL22P35268 128 aaKnown RBP10.6□□□□□ -0.71
MSRB3-201ENST00000308259 NDST2P52849 883 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ATAD3BQ5T9A4 648 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 PPP4R4Q6NUP7 873 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 ABHD15Q6UXT9 468 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 BNIPLQ7Z465 357 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 POLNQ7Z5Q5 900 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 SYTL1Q8IYJ3 562 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 SPATA18Q8TC71 538 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 TMEM246Q9BRR3 403 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 INO80BQ9C086 356 aaPredicted RBP10.6□□□□□ -0.71
MSRB3-201ENST00000308259 UNKQ9C0B0 810 aaKnown RBP10.6□□□□□ -0.71
MSRB3-201ENST00000308259 DNAJC28Q9NX36 388 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 XPO7Q9UIA9 1087 aaKnown RBP10.6□□□□□ -0.71
MSRB3-201ENST00000308259 PCDHGB4Q9UN71 923 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 PCDHGB5Q9Y5G0 923 aa10.6□□□□□ -0.71
MSRB3-201ENST00000308259 E2F8A0AVK6 867 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 NPPAP01160 153 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 CES1P23141 567 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 RPL10P27635 214 aaKnown RBP10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PPP2R2BQ00005 443 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 GRM2Q14416 872 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ZBED5Q49AG3 693 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PDPK2PQ6A1A2 396 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 PLD3Q8IV08 490 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 CADM3Q8N126 398 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 ADCY4Q8NFM4 1077 aa10.59□□□□□ -0.71
MSRB3-201ENST00000308259 CHPT1Q8WUD6 406 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms