RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 BHMTQ93088 406 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TMA16Q96EY4 203 aaKnown RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 SIGLEC10Q96LC7 697 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 FCRL5Q96RD9 977 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CDCA3Q99618 268 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 APOL5Q9BWW9 433 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 FRMD8Q9BZ67 464 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PIDD1Q9HB75 910 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PLAC1Q9HBJ0 212 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 NT5MQ9NPB1 228 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PLK2Q9NYY3 685 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CLEC4EQ9ULY5 219 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF510Q9Y2H8 683 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 MRPS23Q9Y3D9 190 aaKnown RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TTLL3Q9Y4R7 772 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 MIA3Q5JRA6 1907 aa7.09□□□□□ -1.28
PTCD2-201ENST00000308077 TTC24A2A3L6 582 aaPredicted RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ZNF197O14709 1029 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MUSKO15146 869 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 USP12O75317 370 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 LUC7L3O95232 432 aaKnown RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ABHD2P08910 425 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 SSTR1P30872 391 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ETFBP38117 255 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 IFNAR2P48551 515 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 EIF3BP55884 814 aaKnown RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MAXP61244 160 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 NIPAL4Q0D2K0 466 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 IHHQ14623 411 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 LBRQ14739 615 aaKnown RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 CCDC38Q502W7 563 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 TCEAL5Q5H9L2 206 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MARC1Q5VT66 337 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 RNF219Q5W0B1 726 aaPredicted RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 IL31Q6EBC2 164 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 LRRC8BQ6P9F7 803 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ELMSAN1Q6PJG2 1045 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ARID3BQ8IVW6 561 aaPredicted RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 OR52K1Q8NGK4 314 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 PYROXD1Q8WU10 500 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 TTC25Q96NG3 672 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 LRRC3BQ96PB8 259 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 TRIM56Q9BRZ2 755 aaKnown RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ACE2Q9BYF1 805 aaPredicted RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 TMBIM4Q9HC24 238 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 XAB2Q9HCS7 855 aaKnown RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MED4Q9NPJ6 270 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 OR51B4Q9Y5P0 310 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 CFAP47Q6ZTR5 3102 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 H0Y626 953 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 KDELR3O43731 214 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 OPA1O60313 960 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 SNAP91O60641 907 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 RNF40O75150 1001 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 GJB3O75712 270 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ZMPSTE24O75844 475 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 CD160O95971 181 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MMP2P08253 660 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MLNP12872 115 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 TCF3P15923 654 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 GCAP28676 217 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 CSKP41240 450 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MMP13P45452 471 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 RENBPP51606 427 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 OXCT1P55809 520 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 CRADDP78560 199 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ARF5P84085 180 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 DSC2Q02487 901 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 IFFO1Q0D2I5 559 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 GPS2Q13227 327 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 LONRF1Q17RB8 773 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 KRT71Q3SY84 523 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 DOPEY1Q5JWR5 2465 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 TMCO4Q5TGY1 634 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 FYB2Q5VWT5 728 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 SYCE2Q6PIF2 218 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 TMEM184AQ6ZMB5 413 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 PRPF39Q86UA1 669 aaKnown RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MFN1Q8IWA4 741 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ATP11CQ8NB49 1132 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 DDI1Q8WTU0 396 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 RSPRY1Q96DX4 576 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ALG14Q96F25 216 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 APOL2Q9BQE5 337 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 SPON2Q9BUD6 331 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 TMEM109Q9BVC6 243 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 MUC3BQ9H195 1237 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 LINC00597Q9H2U6 94 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 NSUN3Q9H649 340 aaKnown RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 VPS37BQ9H9H4 285 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 ATP13A1Q9HD20 1204 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 CASS4Q9NQ75 786 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 DZANK1Q9NVP4 752 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 DLL3Q9NYJ7 618 aa7.08□□□□□ -1.28
PTCD2-201ENST00000308077 KIF26AQ9ULI4 1882 aaPredicted RBP7.08□□□□□ -1.28
PTCD2-201ENST00000308077 CFAP54Q96N23 3096 aa7.07□□□□□ -1.28
PTCD2-201ENST00000308077 MYO9BQ13459 2157 aa7.07□□□□□ -1.28
PTCD2-201ENST00000308077 A0A087WUV0 522 aaPredicted RBP7.07□□□□□ -1.28
PTCD2-201ENST00000308077 TYW5A2RUC4 315 aaKnown RBP7.07□□□□□ -1.28
PTCD2-201ENST00000308077 SMIM23A6NLE4 172 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms