RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 DDTLA6NHG4 134 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 DPEP1P16444 411 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 PGAM1P18669 254 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 SEMG2Q02383 582 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 KLF1Q13351 362 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 IL18Q14116 193 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 ZNF772Q68DY9 489 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 C12orf56Q8IXR9 622 aa12.78□□□□□ -0.36
USP38-201ENST00000307017 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
USP38-201ENST00000307017 CDC42BPBQ9Y5S2 1711 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 A0A1W2PRG6 482 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 EPHB6O15197 1021 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 SUPT20HL2P0C7V6 817 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 PDK2Q15119 407 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 FAM183BPQ6ZVS7 135 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 DENND1CQ8IV53 801 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 SETD6Q8TBK2 473 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 ZNF606Q8WXB4 792 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 SPOCK2Q92563 424 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 FAM129BQ96TA1 746 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 CPNE1Q99829 537 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 TRPV5Q9NQA5 729 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 PCDHAC2Q9Y5I4 1007 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 SHROOM2Q13796 1616 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 COX4I1P13073 169 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 CYP2A7P20853 494 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 CRY1Q16526 586 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 FAM156AQ8NDB6 213 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 OR4A15Q8NGL6 344 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 NEK7Q8TDX7 302 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 FCRL4Q96PJ5 515 aa12.77□□□□□ -0.36
USP38-201ENST00000307017 MTSS1O43312 755 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 RPN2P04844 631 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 KLRC2P26717 231 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 PPP2R1BP30154 601 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 NAGLUP54802 743 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 RAB25P57735 213 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 ADAM17P78536 824 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 HYIQ5T013 277 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 UNC5AQ6ZN44 842 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 MIR1-1HGQ9H1L0 117 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 COPG2Q9UBF2 871 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 CD84Q9UIB8 345 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 R3HDM2Q9Y2K5 976 aaKnown RBP12.77□□□□□ -0.37
USP38-201ENST00000307017 SHOX2O60902 331 aaPredicted RBP12.77□□□□□ -0.37
USP38-201ENST00000307017 RLN1P04808 185 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 CCNG2Q16589 344 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 PAGE2Q7Z2X7 111 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 RBM23Q86U06 439 aaKnown RBP12.77□□□□□ -0.37
USP38-201ENST00000307017 SMYD1Q8NB12 490 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 C3orf20Q8ND61 904 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 CAVIN3Q969G5 261 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 TMEM169Q96HH4 297 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 ZNRF3Q9ULT6 936 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 NPEPPSL1A6NEC2 478 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 EML1O00423 815 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 FSBPO95073 299 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
USP38-201ENST00000307017 CDH13P55290 713 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 XRCC4Q13426 336 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 NBPF12Q5TAG4 269 aaPredicted RBP12.77□□□□□ -0.37
USP38-201ENST00000307017 TMEM159Q96B96 161 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 ZNF224Q9NZL3 707 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.37
USP38-201ENST00000307017 RBP1P09455 135 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 PABPC1P11940 636 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 BIKQ13323 160 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CMC1Q7Z7K0 106 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 SELENOMQ8WWX9 145 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 COPS5Q92905 334 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 ELAC1Q9H777 363 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 EURLQ9NYK6 297 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 ANAPC2Q9UJX6 822 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CCL22O00626 93 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 RBMXL2O75526 392 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 DGKEP52429 567 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 WASHC2DQ5SRD0 308 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 ATAD3BQ5T9A4 648 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 SVOPQ8N4V2 548 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 RBM7Q9Y580 266 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.76□□□□□ -0.371e-7■■■■■ 45.3
USP38-201ENST00000307017 SMIM30A4D0T7 59 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 TEX28O15482 410 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 ZNF432O94892 652 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CSN2P05814 226 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CHRNGP07510 517 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 IL12AP29459 219 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 KCNA10Q16322 511 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 Q4G0T1 1027 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 APTXQ7Z2E3 356 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 SLC22A9Q8IVM8 553 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CLYBLQ8N0X4 340 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CCDC126Q96EE4 140 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CYP2S1Q96SQ9 504 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 WDR55Q9H6Y2 383 aaPredicted RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms