RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ALG1LQ6GMV1 187 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 DENND5AQ6IQ26 1287 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 RANBP10Q6VN20 620 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 DENND1CQ8IV53 801 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 C4orf33Q8N1A6 199 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 ACMSDQ8TDX5 336 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 MYEOVQ96EZ4 313 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 CERS2Q96G23 380 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 APOPT1Q96IL0 206 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 ZFRQ96KR1 1074 aaKnown RBP12.19□□□□□ -0.46
TPM3-202ENST00000302206 RANBP9Q96S59 729 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 CPNE1Q99829 537 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 LRFN3Q9BTN0 628 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 LRRC3Q9BY71 257 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 MTIF3Q9H2K0 278 aaKnown RBP12.19□□□□□ -0.46
TPM3-202ENST00000302206 PDFQ9HBH1 243 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 ATP13A1Q9HD20 1204 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 NSMCE4AQ9NXX6 385 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 CXXC1Q9P0U4 656 aaPredicted RBP12.19□□□□□ -0.46
TPM3-202ENST00000302206 MSRAQ9UJ68 235 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 AGO1Q9UL18 857 aaKnown RBP12.19□□□□□ -0.46
TPM3-202ENST00000302206 ZNF510Q9Y2H8 683 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 TBC1D30Q9Y2I9 924 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 ZFP37Q9Y6Q3 630 aaPredicted RBP12.19□□□□□ -0.46
TPM3-202ENST00000302206 RPS6KL1Q9Y6S9 549 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 CHD5Q8TDI0 1954 aa12.19□□□□□ -0.46
TPM3-202ENST00000302206 MYO18AQ92614 2054 aaKnown RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 ZCWPW2A0A1B0GU75 182 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 TRIM49D1C9J1S8 452 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 GFRA2O00451 464 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 EBAG9O00559 213 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 KDELR3O43731 214 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 USP12O75317 370 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 SPAG7O75391 227 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 FGF19O95750 216 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 MBL2P11226 248 aaPredicted RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 ALADP13716 330 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 CES1P23141 567 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 CDC25CP30307 473 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 NEK3P51956 506 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 WDR4P57081 412 aaKnown RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 SLC7A9P82251 487 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 SLC10A7Q0GE19 358 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 ADGRE1Q14246 886 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 LBRQ14739 615 aaKnown RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 TMEM31Q5JXX7 168 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 CERCAMQ5T4B2 595 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 GRTP1Q5TC63 336 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 PKN3Q6P5Z2 889 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 PACS1Q6VY07 963 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 Q6ZNB5 142 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 TMC7Q7Z402 723 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 CPLX4Q7Z7G2 160 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 CIR1Q86X95 450 aaPredicted RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 TMC8Q8IU68 726 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 FAM217AQ8IXS0 508 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 ELMOD1Q8N336 334 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 BBS5Q8N3I7 341 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 KREMEN2Q8NCW0 462 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 IPMKQ8NFU5 416 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 SPATA22Q8NHS9 363 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 MGARPQ8TDB4 240 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 MRPS31Q92665 395 aaKnown RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 ZNF669Q96BR6 464 aaPredicted RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 MRGPRX2Q96LB1 330 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 PRICKLE1Q96MT3 831 aaPredicted RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
TPM3-202ENST00000302206 FICDQ9BVA6 458 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 PRKD2Q9BZL6 878 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 KIF9Q9HAQ2 790 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 NT5MQ9NPB1 228 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 GKN1Q9NS71 199 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 PRKAG3Q9UGI9 489 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 OBSL1O75147 1896 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 GBF1Q92538 1859 aa12.18□□□□□ -0.46
TPM3-202ENST00000302206 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.17□□□□□ -0.46
TPM3-202ENST00000302206 SOBPA7XYQ1 873 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 C5orf67F2Z3F1 127 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 TLL1O43897 1013 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 RFPL1O75677 317 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 PIAS1O75925 651 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 MT-CYBP00156 380 aaPredicted RBP12.17□□□□□ -0.46
TPM3-202ENST00000302206 EPOP01588 193 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 MMP2P08253 660 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 BMP1P13497 986 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 ADRA1DP25100 572 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 HOXD9P28356 352 aaPredicted RBP12.17□□□□□ -0.46
TPM3-202ENST00000302206 RPA3P35244 121 aaPredicted RBP12.17□□□□□ -0.46
TPM3-202ENST00000302206 ACVRL1P37023 503 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 GP5P40197 560 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 CCT5P48643 541 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 CSE1LP55060 971 aaKnown RBP12.17□□□□□ -0.46
TPM3-202ENST00000302206 WNT3AP56704 352 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 ZNF177Q13360 481 aaPredicted RBP12.17□□□□□ -0.46
TPM3-202ENST00000302206 OLIG2Q13516 323 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 LRRC14Q15048 493 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 STXBP5Q5T5C0 1151 aa12.17□□□□□ -0.46
TPM3-202ENST00000302206 HHATQ5VTY9 493 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms