RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PIGRP01833 764 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 THP07101 528 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 OR1G1P47890 313 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 DLG1Q12959 904 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 PRKAA1Q13131 559 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 CCDC153Q494R4 210 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 C9orf57Q5W0N0 161 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 B3GALT6Q96L58 329 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 SEPT5Q99719 369 aaPredicted RBP14.24□□□□□ -0.13
SDC2-201ENST00000302190 CDH23Q9H251 3354 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 USP46P62068 366 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 SPANXN3Q5MJ09 141 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 DNAJC14Q6Y2X3 702 aaPredicted RBP14.24□□□□□ -0.13
SDC2-201ENST00000302190 RBM44Q6ZP01 1051 aaKnown RBP14.24□□□□□ -0.13
SDC2-201ENST00000302190 SAPCD2Q86UD0 394 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 SATL1Q86VE3 508 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 PBXIP1Q96AQ6 731 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 VPS50Q96JG6 964 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 EGFL8Q99944 293 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 PDLIM7Q9NR12 457 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 PTPRFP10586 1907 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 RLFQ13129 1914 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 TTC24A2A3L6 582 aaPredicted RBP14.24□□□□□ -0.13
SDC2-201ENST00000302190 HNRNPRO43390 633 aaKnown RBP14.24□□□□□ -0.13
SDC2-201ENST00000302190 SH3BP5O60239 455 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 STBD1O95210 358 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 TFEBP19484 476 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 IL10P22301 178 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 PCSK1P29120 753 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 ADRA1BP35368 520 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 CD151P48509 253 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 KRT72Q14CN4 511 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 ZNF280DQ6N043 979 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 TTC33Q6PID6 262 aaPredicted RBP14.24□□□□□ -0.13
SDC2-201ENST00000302190 FRA10AC1Q70Z53 315 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 ZMAT2Q96NC0 199 aaKnown RBP14.24□□□□□ -0.13
SDC2-201ENST00000302190 FAM192AQ9GZU8 254 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 MAF1Q9H063 256 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 ADAMTS5Q9UNA0 930 aa14.24□□□□□ -0.13
SDC2-201ENST00000302190 INPP4BO15327 924 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 C22orf31O95567 290 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 ICAM3P32942 547 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 PNPLA4P41247 253 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 GRIA3P42263 894 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 ACTR3P61158 418 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 MRPS5P82675 430 aaKnown RBP14.23□□□□□ -0.13
SDC2-201ENST00000302190 STX5Q13190 355 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 TAF1CQ15572 869 aaPredicted RBP14.23□□□□□ -0.13
SDC2-201ENST00000302190 NEPROQ6NW34 567 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 MARK2Q7KZI7 788 aaKnown RBP14.23□□□□□ -0.13
SDC2-201ENST00000302190 SPNS2Q8IVW8 549 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 JADE3Q92613 823 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 SKA1Q96BD8 255 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 FTHL17Q9BXU8 183 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
SDC2-201ENST00000302190 OCEL1Q9H607 264 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 EML4Q9HC35 981 aaKnown RBP14.23□□□□□ -0.13
SDC2-201ENST00000302190 NDFIP2Q9NV92 336 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 MYBPHLA2RUH7 354 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 FAM149AA5PLN7 773 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 CHRM3P20309 590 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 NFKBIAP25963 317 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 THPOP40225 353 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 BRCC3P46736 316 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 MGAT5BQ3V5L5 792 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 NOMO2Q5JPE7 1267 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 AGAP9Q5VTM2 703 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 ESRP1Q6NXG1 681 aaKnown RBP14.23□□□□□ -0.13
SDC2-201ENST00000302190 OLFML1Q6UWY5 402 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 MYO1HQ8N1T3 1032 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 ANKLE1Q8NAG6 615 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 EXOC2Q96KP1 924 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 C20orf27Q9GZN8 174 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 PCDHAC1Q9H158 963 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 KCNH4Q9UQ05 1017 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 AP4B1Q9Y6B7 739 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 CNTRLQ7Z7A1 2325 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 C15orf38-AP3S2A0A0A6YYH1 394 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 MRASO14807 208 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 ANXA9O76027 345 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 VAV1P15498 845 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 SLC25A52Q3SY17 297 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 CLEC6AQ6EIG7 209 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 ARPINQ7Z6K5 226 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 DSELQ8IZU8 1212 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 CLEC4FQ8N1N0 589 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 BBS5Q8N3I7 341 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 HBEGFQ99075 208 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 CIB1Q99828 191 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 CDH19Q9H159 772 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 LNPEPQ9UIQ6 1025 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 BTRCQ9Y297 605 aa14.23□□□□□ -0.13
SDC2-201ENST00000302190 KCNU1A8MYU2 1149 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 BIRC5O15392 142 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 ALDOAP04075 364 aaKnown RBP14.22□□□□□ -0.13
SDC2-201ENST00000302190 OR4Q2P0C623 313 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 ITGB6P18564 788 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 SLC18A2Q05940 514 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 TWF1Q12792 350 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 LSM12Q3MHD2 195 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms