RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 KATNBL1Q9H079 304 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 SDCBP2Q9H190 292 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 UBP1Q9NZI7 540 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 NCKIPSDQ9NZQ3 722 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 IGSF9Q9P2J2 1179 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 DYRK1BQ9Y463 629 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 GOLGA8TH3BQL2 631 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 MAGEC1O60732 1142 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 DIAPH2O60879 1101 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 FTH1P02794 183 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 GRK3P35626 688 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 DGKGP49619 791 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 WNT3AP56704 352 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 DSG1Q02413 1049 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 DSC3Q14574 896 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 EFTUD2Q15029 972 aaKnown RBP eCLIP8.42□□□□□ -1.068e-8■■■■□ 20.9
SNRPD1-201ENST00000300413 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 NPNTQ6UXI9 565 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 SPATA21Q7Z572 469 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 DDIASQ8IXT1 998 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 C4orf33Q8N1A6 199 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 PRPF18Q99633 342 aaKnown RBP8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 ILKAPQ9H0C8 392 aaPredicted RBP8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 Q9H521 79 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 WDR6Q9NNW5 1121 aaKnown RBP8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 ABCF3Q9NUQ8 709 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 SLC13A4Q9UKG4 626 aa8.42□□□□□ -1.06
SNRPD1-201ENST00000300413 HTRA3P83110 453 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 KBTBD12Q3ZCT8 623 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 C1orf220Q5T0J3 134 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ZNF470Q6ECI4 717 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 LVRNQ6Q4G3 990 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 KYAT3Q6YP21 454 aaKnown RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 FAM47EQ6ZV65 393 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 CHPFQ8IZ52 775 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 KLHL23Q8NBE8 558 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 MCOLN3Q8TDD5 553 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 SH3RF2Q8TEC5 729 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 SLC22A17Q8WUG5 538 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ATL1Q8WXF7 558 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 TOP1MTQ969P6 601 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ZIC5Q96T25 663 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 MCOLN1Q9GZU1 580 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 WDR70Q9NW82 654 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ZDHHC7Q9NXF8 308 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 TNPO3Q9Y5L0 923 aaKnown RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 FER1L6Q2WGJ9 1857 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ALOX15BO15296 676 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 NDUFS2O75306 463 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 MLLT6P55198 1093 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 WDR5P61964 334 aaKnown RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 OTOAQ7RTW8 1153 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ZNF572Q7Z3I7 529 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 SLC39A11Q8N1S5 342 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 SLCO2A1Q92959 643 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 CERS2Q96G23 380 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 SLC2A13Q96QE2 648 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 MCCC1Q96RQ3 725 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 EPN3Q9H201 632 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 MANSC1Q9H8J5 431 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 MPP6Q9NZW5 540 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 AJAP1Q9UKB5 411 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 E2F8A0AVK6 867 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 KIAA0355O15063 1070 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 MFSD11O43934 449 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 VAPBO95292 243 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 AP2A1O95782 977 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 FGFR3P22607 806 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 HTR1BP28222 390 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 SOX4Q06945 474 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 GRSF1Q12849 480 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 CAMK2GQ13555 558 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 PTAR1Q7Z6K3 402 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 NUF2Q9BZD4 464 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 TDP1Q9NUW8 608 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 PSD3Q9NYI0 1048 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 CDYLQ9Y232 598 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ZFP37Q9Y6Q3 630 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 SPACA6W5XKT8 324 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 GABRDO14764 452 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 CATP04040 527 aaKnown RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 THOP1P52888 689 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 NAA30Q147X3 362 aaPredicted RBP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ZBTB6Q15916 424 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 KIAA0408Q6ZU52 694 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 TCEAL8Q8IYN2 117 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 CCDC185Q8N715 623 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 LGMNQ99538 433 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 SLC7A5P2Q9GIP4 190 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 CDH19Q9H159 772 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 L3MBTL1Q9Y468 752 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 PCDHB1Q9Y5F3 818 aa8.41□□□□□ -1.06
SNRPD1-201ENST00000300413 ECM29Q5VYK3 1845 aa8.4□□□□□ -1.06
SNRPD1-201ENST00000300413 CCDC195A0A1B0GUA6 201 aa8.4□□□□□ -1.06
SNRPD1-201ENST00000300413 SOBPA7XYQ1 873 aa8.4□□□□□ -1.06
SNRPD1-201ENST00000300413 H3BQF6 201 aa8.4□□□□□ -1.06
SNRPD1-201ENST00000300413 GOLGA8RI6L899 631 aa8.4□□□□□ -1.06
SNRPD1-201ENST00000300413 PER2O15055 1255 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms