RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 FIG4Q92562 907 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 ACOX2Q99424 681 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 TBL1YQ9BQ87 522 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 MUC3BQ9H195 1237 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 ZNF229Q9UJW7 825 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
CASC4-201ENST00000299957 A0A1B0GVG6 124 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 H0Y626 953 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 TRIM16O95361 564 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 PNPLA4P41247 253 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 MRPS5P82675 430 aaKnown RBP13.47□□□□□ -0.25
CASC4-201ENST00000299957 OCA2Q04671 838 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 TRAF2Q12933 501 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 KRT72Q14CN4 511 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 PTGR2Q8N8N7 351 aaPredicted RBP13.47□□□□□ -0.25
CASC4-201ENST00000299957 TSPAN14Q8NG11 270 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 GIPC2Q8TF65 315 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 TSPAN17Q96FV3 270 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 ATP8B3O60423 1300 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 PGK1P00558 417 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 APOA4P06727 396 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 NR6A1Q15406 480 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 C9orf57Q5W0N0 161 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 C11orf74Q86VG3 221 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 MTFMTQ96DP5 389 aaKnown RBP13.47□□□□□ -0.25
CASC4-201ENST00000299957 SIGLEC10Q96LC7 697 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 BEGAINQ9BUH8 593 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 MRPL40Q9NQ50 206 aaKnown RBP13.47□□□□□ -0.25
CASC4-201ENST00000299957 LRRC42Q9Y546 428 aa13.47□□□□□ -0.25
CASC4-201ENST00000299957 TSPAN1O60635 241 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 LRIG2O94898 1065 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 MPOP05164 745 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 PPARGP37231 505 aaPredicted RBP13.46□□□□□ -0.25
CASC4-201ENST00000299957 TAS2R39P59534 338 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 DGCR6Q14129 220 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 PTRHD1Q6GMV3 140 aaKnown RBP13.46□□□□□ -0.25
CASC4-201ENST00000299957 OVOS1Q6IE37 1185 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 KBTBD2Q8IY47 623 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 FNDC5Q8NAU1 212 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 NRG4Q8WWG1 115 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 LRTOMTQ8WZ04 291 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 SIKE1Q9BRV8 207 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 UBE2OQ9C0C9 1292 aaKnown RBP13.46□□□□□ -0.25
CASC4-201ENST00000299957 MMADHCQ9H3L0 296 aaPredicted RBP13.46□□□□□ -0.25
CASC4-201ENST00000299957 KANSL1LA0AUZ9 987 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 BCLAF3A2AJT9 711 aaKnown RBP13.46□□□□□ -0.25
CASC4-201ENST00000299957 TREHO43280 583 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 RNASEH1O60930 286 aaKnown RBP13.46□□□□□ -0.25
CASC4-201ENST00000299957 TGDSO95455 350 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 CLIC3O95833 236 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 PSEN1P49768 467 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 DDR2Q16832 855 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 CNPY1Q3B7I2 92 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 VPS26BQ4G0F5 336 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 LDLRAP1Q5SW96 308 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 CWF19L1Q69YN2 538 aaKnown RBP13.46□□□□□ -0.25
CASC4-201ENST00000299957 SHKBP1Q8TBC3 707 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 LPGAT1Q92604 370 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 ROGDIQ9GZN7 287 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 RAP2CQ9Y3L5 183 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 U3KQV3 271 aa13.46□□□□□ -0.25
CASC4-201ENST00000299957 FFAR3O14843 346 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 BIRC5O15392 142 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 GPR42O15529 346 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 MAGEC1O60732 1142 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 OAS1P00973 400 aaKnown RBP13.46□□□□□ -0.26
CASC4-201ENST00000299957 ADARP55265 1226 aaKnown RBP13.46□□□□□ -0.26
CASC4-201ENST00000299957 BFSP2Q13515 415 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 TLDC1Q6P9B6 456 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 B3GNT9Q6UX72 402 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 C15orf39Q6ZRI6 1047 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 SPPL2CQ8IUH8 684 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 CFAP52Q8N1V2 620 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 FBXO30Q8TB52 745 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 CALML6Q8TD86 181 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.46□□□□□ -0.264e-10■■■■■ 86.3
CASC4-201ENST00000299957 GORASP1Q9BQQ3 440 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 GPR63Q9BZJ6 419 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 IL22Q9GZX6 179 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 USP29Q9HBJ7 922 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 PIGVQ9NUD9 493 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 SLC30A1Q9Y6M5 507 aa13.46□□□□□ -0.26
CASC4-201ENST00000299957 PDLIM1O00151 329 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 PMM2O15305 246 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 STX7O15400 261 aaKnown RBP13.45□□□□□ -0.26
CASC4-201ENST00000299957 MAP3K13O43283 966 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 MAN1A2O60476 641 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 FOXD2O60548 495 aaPredicted RBP13.45□□□□□ -0.26
CASC4-201ENST00000299957 HGFP14210 728 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 OR1E1P30953 314 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 GALNT3Q14435 633 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 SLC25A52Q3SY17 297 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 GPR107Q5VW38 600 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 CIR1Q86X95 450 aaPredicted RBP13.45□□□□□ -0.26
CASC4-201ENST00000299957 SCAMP5Q8TAC9 235 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 FAM162AQ96A26 154 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms