RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TARSL2A2RTX5 802 aaKnown RBP21.54■■□□□ 1.04
SMCO4-201ENST00000298966 E9PAM4 449 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 TJP3O95049 919 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 IGLV3-19P01714 112 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 RARAP10276 462 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 GJC1P36383 396 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 GRK6P43250 576 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 CSNK1EP49674 416 aaKnown RBP21.54■■□□□ 1.04
SMCO4-201ENST00000298966 AFF3P51826 1226 aaKnown RBP21.54■■□□□ 1.04
SMCO4-201ENST00000298966 NNTQ13423 1086 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 ENPP2Q13822 863 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 TEAD4Q15561 434 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 TAZQ16635 292 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 ARL13BQ3SXY8 428 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 ERMARDQ5T6L9 678 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 C1orf216Q8TAB5 229 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 FAM71BQ8TC56 605 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 RNF139Q8WU17 664 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 FRMD8P1Q9BZ68 369 aaPredicted RBP21.54■■□□□ 1.04
SMCO4-201ENST00000298966 ZWILCHQ9H900 591 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 RCOR3Q9P2K3 495 aaPredicted RBP21.54■■□□□ 1.04
SMCO4-201ENST00000298966 NAALADL1Q9UQQ1 740 aa21.54■■□□□ 1.04
SMCO4-201ENST00000298966 NUMA1Q14980 2115 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 LRRD1A4D1F6 860 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 KDELR1P24390 212 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 IL1R2P27930 398 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 SMAD1Q15797 465 aaKnown RBP21.53■■□□□ 1.04
SMCO4-201ENST00000298966 GEN1Q17RS7 908 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 KIF19Q2TAC6 998 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 SCYL2Q6P3W7 929 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 SPOCD1Q6ZMY3 1216 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 Q6ZNB5 142 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 CACUL1Q86Y37 369 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 KCTD6Q8NC69 237 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 PIP4K2CQ8TBX8 421 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 SLC39A7Q92504 469 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 NDRG1Q92597 394 aaKnown RBP21.53■■□□□ 1.04
SMCO4-201ENST00000298966 SERPINB11Q96P15 392 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 FAM204AQ9H8W3 233 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 PCSK1NQ9UHG2 260 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 DNMT3LQ9UJW3 386 aa21.53■■□□□ 1.04
SMCO4-201ENST00000298966 TK2O00142 265 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 IGLV3-25P01717 112 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 PRB1P04280 392 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 RARGP13631 454 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 TCF4P15884 667 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 CDKN2BP42772 138 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 TFDP2Q14188 446 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 DPYSL2Q16555 572 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 CYP1B1Q16678 543 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 BRMS1LQ5PSV4 323 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 ACBD5Q5T8D3 534 aaPredicted RBP21.52■■□□□ 1.04
SMCO4-201ENST00000298966 SYPL2Q5VXT5 272 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 KLHDC10Q6PID8 442 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 CYP4V2Q6ZWL3 525 aaPredicted RBP21.52■■□□□ 1.04
SMCO4-201ENST00000298966 FAM124AQ86V42 546 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 TTC13Q8NBP0 860 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 ZNF670Q9BS34 389 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 ANKZF1Q9H8Y5 726 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 OSER1Q9NX31 292 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 ZNF510Q9Y2H8 683 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 SNX11Q9Y5W9 270 aa21.52■■□□□ 1.04
SMCO4-201ENST00000298966 hCG_1818297A0A087WSY0 165 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 PENKP01210 267 aaPredicted RBP21.51■■□□□ 1.03
SMCO4-201ENST00000298966 SLC2A3P11169 496 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 HLA-EP13747 358 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 MCM3P25205 808 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 CHRNA3P32297 505 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 CHKAP35790 457 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 CXCR3P49682 368 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 CCT8P50990 548 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 COPAP53621 1224 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 KRT81Q14533 505 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 ZNF234Q14588 700 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 PTPRNQ16849 979 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 INAVAQ3KP66 663 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 C10orf120Q5SQS8 335 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 OTUD1Q5VV17 481 aaPredicted RBP21.51■■□□□ 1.03
SMCO4-201ENST00000298966 DHRS13Q6UX07 377 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 ANKS1BQ7Z6G8 1248 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 SCD5Q86SK9 330 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 DQX1Q8TE96 717 aaKnown RBP21.51■■□□□ 1.03
SMCO4-201ENST00000298966 PEBP4Q96S96 227 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 SNRNP25Q9BV90 132 aaKnown RBP21.51■■□□□ 1.03
SMCO4-201ENST00000298966 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.51■■□□□ 1.03
SMCO4-201ENST00000298966 DDIT4Q9NX09 232 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 FEZ2Q9UHY8 353 aaPredicted RBP21.51■■□□□ 1.03
SMCO4-201ENST00000298966 NUDT5Q9UKK9 219 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 KALRNO60229 2985 aa21.51■■□□□ 1.03
SMCO4-201ENST00000298966 A0A1W2PQH9 124 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 IRAK2O43187 625 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 PHF2O75151 1096 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 STC2O76061 302 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 EPHX1P07099 455 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 ARSEP51690 589 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 CDH6P55285 790 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 KLF1Q13351 362 aaPredicted RBP21.5■■□□□ 1.03
SMCO4-201ENST00000298966 EIF4HQ15056 248 aaKnown RBP21.5■■□□□ 1.03
SMCO4-201ENST00000298966 EFHC2Q5JST6 749 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 FYB2Q5VWT5 728 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms