RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CCR2P41597 374 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 FRG1Q14331 258 aaKnown RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 SPANXN3Q5MJ09 141 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 DENND5AQ6IQ26 1287 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 CXorf57Q6NSI4 855 aaKnown RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 ZNF449Q6P9G9 518 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 TMEM135Q86UB9 458 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 TADA1Q96BN2 335 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 MRGPRX2Q96LB1 330 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 FAM210AQ96ND0 272 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 TGS1Q96RS0 853 aaKnown RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 SH3GL3Q99963 347 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 SLC46A2Q9BY10 475 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 ACE2Q9BYF1 805 aaPredicted RBP15.79■□□□□ 0.12
LSM6-201ENST00000296581 IL22Q9GZX6 179 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 VPS45Q9NRW7 570 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 HCFC1R1Q9NWW0 138 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 SAMD15Q9P1V8 674 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 ZNF510Q9Y2H8 683 aa15.79■□□□□ 0.12
LSM6-201ENST00000296581 MAGEB16A2A368 324 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 SRRM3A6NNA2 597 aaPredicted RBP15.78■□□□□ 0.12
LSM6-201ENST00000296581 KDELR3O43731 214 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 RFPL2O75678 378 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 POLBP06746 335 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 INHBAP08476 426 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 HNRNPA1P09651 372 aaKnown RBP eCLIP15.78■□□□□ 0.12
LSM6-201ENST00000296581 EPCAMP16422 314 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 GJA1P17302 382 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 LSP1P33241 339 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 ERVK-21P61565 698 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 NIPAL4Q0D2K0 466 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 SHHQ15465 462 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 CERCAMQ5T4B2 595 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 STXBP5Q5T5C0 1151 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 RANBP10Q6VN20 620 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 ZNF783Q6ZMS7 281 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 CCDC117Q8IWD4 279 aaPredicted RBP15.78■□□□□ 0.12
LSM6-201ENST00000296581 PGBD5Q8N414 524 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.78■□□□□ 0.12
LSM6-201ENST00000296581 PPM1NQ8N819 430 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 HJURPQ8NCD3 748 aaPredicted RBP15.78■□□□□ 0.12
LSM6-201ENST00000296581 IPMKQ8NFU5 416 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 SHKBP1Q8TBC3 707 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 FICDQ9BVA6 458 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 TRABDQ9H4I3 376 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 IKBKGQ9Y6K9 419 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 NOTCH4Q99466 2003 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 FAM237BA0A1B0GVD1 139 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 TMEM120BA0PK00 339 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 MMP2P08253 660 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 PTPN2P17706 415 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 DDX6P26196 483 aaKnown RBP eCLIP15.78■□□□□ 0.12
LSM6-201ENST00000296581 CTAGE3PQ8IX95 158 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 ARRDC2Q8TBH0 407 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 BCAS4Q8TDM0 211 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 CFAP97Q9P2B7 532 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 DNMT3BQ9UBC3 853 aaKnown RBP15.78■□□□□ 0.12
LSM6-201ENST00000296581 SOX13Q9UN79 622 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 ARHGAP26Q9UNA1 814 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 MIA3Q5JRA6 1907 aa15.78■□□□□ 0.12
LSM6-201ENST00000296581 IQANK1A0A1B0GTG1 560 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 MOSPD3O75425 235 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 PMPCBO75439 489 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 USP1O94782 785 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 ETFBP38117 255 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 CLNS1AP54105 237 aaKnown RBP15.77■□□□□ 0.12
LSM6-201ENST00000296581 OXCT1P55809 520 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 MAXP61244 160 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 IL31Q6EBC2 164 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 ALG1LQ6GMV1 187 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 CPXM2Q8N436 756 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 ARMC2Q8NEN0 867 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 ATXN2LQ8WWM7 1075 aaKnown RBP15.77■□□□□ 0.12
LSM6-201ENST00000296581 ARNT2Q9HBZ2 717 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 ATP13A1Q9HD20 1204 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 SSU72Q9NP77 194 aaKnown RBP15.77■□□□□ 0.12
LSM6-201ENST00000296581 SPATS2LQ9NUQ6 558 aaKnown RBP15.77■□□□□ 0.12
LSM6-201ENST00000296581 RPS6KL1Q9Y6S9 549 aa15.77■□□□□ 0.12
LSM6-201ENST00000296581 MYO7AQ13402 2215 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 A0A1W2PPM1 405 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 EME2A4GXA9 379 aaPredicted RBP15.77■□□□□ 0.11
LSM6-201ENST00000296581 SOBPA7XYQ1 873 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 TBL1XO60907 577 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 POU2F2P09086 479 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 MAGEA10P43363 369 aaPredicted RBP15.77■□□□□ 0.11
LSM6-201ENST00000296581 SLC18A1P54219 525 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 WNT3AP56704 352 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 DSC2Q02487 901 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 PPARDQ03181 441 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 GPM6BQ13491 265 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 NAB1Q13506 487 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 MPP2Q14168 576 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 MARK2Q7KZI7 788 aaKnown RBP15.77■□□□□ 0.11
LSM6-201ENST00000296581 LEMD2Q8NC56 503 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 TMA16Q96EY4 203 aaKnown RBP15.77■□□□□ 0.11
LSM6-201ENST00000296581 FCRL3Q96P31 734 aaPredicted RBP15.77■□□□□ 0.11
LSM6-201ENST00000296581 KIFC1Q9BW19 673 aa15.77■□□□□ 0.11
LSM6-201ENST00000296581 POLR1EQ9GZS1 481 aaKnown RBP15.77■□□□□ 0.11
LSM6-201ENST00000296581 INTS9Q9NV88 658 aaKnown RBP15.77■□□□□ 0.11
LSM6-201ENST00000296581 ZCWPW2A0A1B0GU75 182 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms