RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 ISG20Q96AZ6 181 aaKnown RBP28.19■■■□□ 2.1
CHCHD4-201ENST00000295767 PSKH2Q96QS6 385 aa28.19■■■□□ 2.1
CHCHD4-201ENST00000295767 FERMT1Q9BQL6 677 aa28.19■■■□□ 2.1
CHCHD4-201ENST00000295767 TM6SF2Q9BZW4 377 aa28.19■■■□□ 2.1
CHCHD4-201ENST00000295767 NT5MQ9NPB1 228 aa28.19■■■□□ 2.1
CHCHD4-201ENST00000295767 SLC8A2Q9UPR5 921 aa28.19■■■□□ 2.1
CHCHD4-201ENST00000295767 CFAP69A5D8W1 941 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 TMEM221A6NGB7 291 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 CCDC188H7C350 402 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 M0R296 226 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 ADAM23O75077 832 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 HLA-DQB2P05538 268 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 HNRNPA1L2Q32P51 320 aaKnown RBP28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 CCDC137Q6PK04 289 aaKnown RBP28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 TRMT11Q7Z4G4 463 aaKnown RBP28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 BBS5Q8N3I7 341 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 PCDH20Q8N6Y1 951 aaKnown RBP28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 EXOC2Q96KP1 924 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 CCDC114Q96M63 670 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 SIT1Q9Y3P8 196 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 SGK1O00141 431 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 NEBLO76041 1014 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 RGRP47804 291 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 TEX44Q53QW1 395 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 ZNF567Q8N184 647 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 PTPRN2Q92932 1015 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 CLDN23Q96B33 292 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 GABRG3Q99928 467 aa28.18■■■□□ 2.1
CHCHD4-201ENST00000295767 ZNF189O75820 626 aaPredicted RBP28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 EPHX1P07099 455 aa28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 CHRNA3P32297 505 aa28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 FNTAP49354 379 aa28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 MAXP61244 160 aa28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 C2orf54Q08AI8 447 aa28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 HSF5Q4G112 596 aaPredicted RBP28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 ATXN7L2Q5T6C5 722 aaPredicted RBP28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 KLHL7Q8IXQ5 586 aa28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 AGAP3Q96P47 875 aa28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 VAT1Q99536 393 aa28.17■■■□□ 2.1
CHCHD4-201ENST00000295767 EDDM13A0A1B0GTR0 161 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 BNIP3LO60238 219 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 STIP1P31948 543 aaKnown RBP28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 GAS6Q14393 721 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 SDE2Q6IQ49 451 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 ATL2Q8NHH9 583 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 RTP4Q96DX8 246 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 TEKT5Q96M29 485 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 MGME1Q9BQP7 344 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 KLHL8Q9P2G9 620 aaPredicted RBP28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 AMACRQ9UHK6 382 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 ATP8A1Q9Y2Q0 1164 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 TTLL3Q9Y4R7 772 aa28.16■■■□□ 2.1
CHCHD4-201ENST00000295767 STK10O94804 968 aaKnown RBP28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 DCNP07585 359 aaKnown RBP28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 HOXB2P14652 356 aa28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 HSPA9P38646 679 aaKnown RBP28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 OR2AP1Q8NGE2 309 aa28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 OR2A12Q8NGT7 310 aa28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 ERLEC1Q96DZ1 483 aa28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 SUN2Q9UH99 717 aa28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 MMP17Q9ULZ9 603 aa28.15■■■□□ 2.1
CHCHD4-201ENST00000295767 C5orf60A6NFR6 353 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 CHURC1-FNTBB4DL54 471 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 ZBTB24O43167 697 aaPredicted RBP28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 SIN3BO75182 1162 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 GJB3O75712 270 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 GSRP00390 522 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 RPS9P46781 194 aaKnown RBP28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 KCTD19Q17RG1 926 aaPredicted RBP28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 CARD16Q5EG05 197 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 EOGTQ5NDL2 527 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 ANKRD20A2Q5SQ80 823 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 ANKRD20A1Q5TYW2 823 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 ANKRD20A3Q5VUR7 823 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 GSTA5Q7RTV2 222 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 PID1Q7Z2X4 250 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 GLIS1Q8NBF1 620 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 CCDC110Q8TBZ0 833 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 GDAP1L1Q96MZ0 367 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 SPATA13Q96N96 652 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 CHRDQ9H2X0 955 aa28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 POLR3BQ9NW08 1133 aaPredicted RBP28.14■■■□□ 2.1
CHCHD4-201ENST00000295767 IFNB1P01574 187 aa28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 SNRPD1P62314 119 aaKnown RBP28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 ITKQ08881 620 aa28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 C9orf64Q5T6V5 341 aa28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 DPY19L3Q6ZPD9 716 aa28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 PRUNE1Q86TP1 453 aa28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 OR6K2Q8NGY2 324 aa28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 POLR1EQ9GZS1 481 aaKnown RBP28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 PRSS16Q9NQE7 514 aa28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 TRHDEQ9UKU6 1024 aa28.14■■■□□ 2.09
CHCHD4-201ENST00000295767 TTC24A2A3L6 582 aaPredicted RBP28.13■■■□□ 2.09
CHCHD4-201ENST00000295767 TARSL2A2RTX5 802 aaKnown RBP28.13■■■□□ 2.09
CHCHD4-201ENST00000295767 PI15O43692 258 aa28.13■■■□□ 2.09
CHCHD4-201ENST00000295767 IGSF6O95976 241 aa28.13■■■□□ 2.09
CHCHD4-201ENST00000295767 ETS1P14921 441 aa28.13■■■□□ 2.09
CHCHD4-201ENST00000295767 CR2P20023 1033 aa28.13■■■□□ 2.09
CHCHD4-201ENST00000295767 CD68P34810 354 aaPredicted RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms