RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 VPS45Q9NRW7 570 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 MAGEC1O60732 1142 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 MAXP61244 160 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 ACSM2AQ08AH3 577 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 ACSM2BQ68CK6 577 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 CFAP52Q8N1V2 620 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 NPLOC4Q8TAT6 608 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 SPACA7Q96KW9 195 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 TXNRD2Q9NNW7 524 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 TMCO1Q9UM00 188 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 HBS1LQ9Y450 684 aaKnown RBP17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 VPS4BO75351 444 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 RRM2P31350 389 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 GPR15P49685 360 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 SLC26A9Q7LBE3 791 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 CERS2Q96G23 380 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 MBOAT7Q96N66 472 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 BBS4Q96RK4 519 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 CPXM1Q96SM3 734 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 WARSP23381 471 aaKnown RBP17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 SLC10A6Q3KNW5 377 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 HEXDCQ8WVB3 486 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 FUBP3Q96I24 572 aaKnown RBP eCLIP17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 FGFBP2Q9BYJ0 223 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 TCF7L2Q9NQB0 619 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 KIF13AQ9H1H9 1805 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 KCPQ6ZWJ8 1503 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 RHOQP17081 205 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 FAAP100Q0VG06 881 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 CREG2Q8IUH2 290 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 FNDC5Q8NAU1 212 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 COPS8Q99627 209 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 HGH1Q9BTY7 390 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 E9PBE3 544 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 KLHL41O60662 606 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 BAIAP3O94812 1187 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 TJAP1Q5JTD0 557 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 KYAT3Q6YP21 454 aaKnown RBP17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 DQX1Q8TE96 717 aaKnown RBP17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 TIFAQ96CG3 184 aa17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 CHD2O14647 1828 aaKnown RBP17.91■□□□□ 0.46
CDC42EP3-201ENST00000295324 TACR2P21452 398 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 AGKQ53H12 422 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 POTEHQ6S545 545 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 TCP10LQ8TDR4 215 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PCED1BQ96HM7 432 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 THAP1Q9NVV9 213 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PCDHA11Q9Y5I1 949 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 LTA4HP09960 611 aaKnown RBP17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 SLC1A6P48664 564 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 GPM6BQ13491 265 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 TPGS2Q68CL5 300 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 ZCCHC8Q6NZY4 707 aaKnown RBP17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 FAM124AQ86V42 546 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 GPR88Q9GZN0 384 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 LRRC19Q9H756 370 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PSME2Q9UL46 239 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 RGS14O43566 566 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 ACSL4O60488 711 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 NEK2P51955 445 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 DAB2P98082 770 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 ALDH6A1Q02252 535 aaKnown RBP17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 RAB30Q15771 203 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PKN2Q16513 984 aaKnown RBP17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PTPRNQ16849 979 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 BPIFA1Q9NP55 256 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PCYOX1Q9UHG3 505 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 ZMYM5Q9UJ78 669 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PCDHGC3Q9UN70 934 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 ASB3Q9Y575 518 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 MT-CO1P00395 513 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 SLC35G4P0C7Q5 338 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 WNT3AP56704 352 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 ZDHHC20Q5W0Z9 365 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 UNC5AQ6ZN44 842 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PRR23CQ6ZRP0 262 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 DET1Q7L5Y6 550 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 CYGBQ8WWM9 190 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 FUT8Q9BYC5 575 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 SLC27A6Q9Y2P4 619 aa17.9■□□□□ 0.46
CDC42EP3-201ENST00000295324 PHGDHO43175 533 aaKnown RBP17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 COL6A1P12109 1028 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 TSHRP16473 764 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 CYTH1Q15438 398 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 WLSQ5T9L3 541 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 CHMP1BQ7LBR1 199 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 XYLT1Q86Y38 959 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 STK32AQ8WU08 396 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 MYO19Q96H55 970 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 MAGED4Q96JG8 741 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 TMPRSS4Q9NRS4 437 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 DUS2Q9NX74 493 aaKnown RBP17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 SNX8Q9Y5X2 465 aa17.89■□□□□ 0.46
CDC42EP3-201ENST00000295324 SLC25A14O95258 325 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 CTPS1P17812 591 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 ELP6Q0PNE2 266 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 BNC2Q6ZN30 1099 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 COLGALT2Q8IYK4 626 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 FNIP1Q8TF40 1166 aa17.89■□□□□ 0.45
CDC42EP3-201ENST00000295324 IMPAD1Q9NX62 359 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms