RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 MMP13P45452 471 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 RENBPP51606 427 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 IFI35P80217 286 aaPredicted RBP15.4■□□□□ 0.06
CCDC140-201ENST00000295226 SLC7A5Q01650 507 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 DR1Q01658 176 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 SULT2A1Q06520 285 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 ZNF33AQ06730 810 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 ITKQ08881 620 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 GRSF1Q12849 480 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCDC140-201ENST00000295226 HNRNPDQ14103 355 aaKnown RBP15.4■□□□□ 0.06
CCDC140-201ENST00000295226 ZNF234Q14588 700 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 DLG2Q15700 870 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 FNDC3BQ53EP0 1204 aaKnown RBP15.4■□□□□ 0.06
CCDC140-201ENST00000295226 TEX44Q53QW1 395 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 C2orf27AQ580R0 203 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 ANKRD20A2Q5SQ80 823 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 ATXN7L2Q5T6C5 722 aaPredicted RBP15.4■□□□□ 0.06
CCDC140-201ENST00000295226 ANKRD20A1Q5TYW2 823 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 ANKRD20A3Q5VUR7 823 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 SH2D3CQ8N5H7 860 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 TEX26Q8N6G2 289 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 CCDC89Q8N998 374 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 NSMCE1Q8WV22 266 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 KLHL8Q9P2G9 620 aaPredicted RBP15.4■□□□□ 0.06
CCDC140-201ENST00000295226 WNT16Q9UBV4 365 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 NEU2Q9Y3R4 380 aa15.4■□□□□ 0.06
CCDC140-201ENST00000295226 ZSCAN5CA6NGD5 496 aaPredicted RBP15.39■□□□□ 0.05
CCDC140-201ENST00000295226 TIMM44O43615 452 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 ZNF821O75541 412 aaPredicted RBP15.39■□□□□ 0.05
CCDC140-201ENST00000295226 NEBLO76041 1014 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 ECEL1O95672 775 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 KRT14P02533 472 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 ZNF235Q14590 738 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 CASP8Q14790 479 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 PPP1R7Q15435 360 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 PREPLQ4J6C6 727 aaPredicted RBP15.39■□□□□ 0.05
CCDC140-201ENST00000295226 SYCP2LQ5T4T6 812 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 FAXCQ5TGI0 409 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 C8orf74Q6P047 294 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 CCNI2Q6ZMN8 369 aaPredicted RBP15.39■□□□□ 0.05
CCDC140-201ENST00000295226 OR6K2Q8NGY2 324 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 NSMCE3Q96MG7 304 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 ZNF599Q96NL3 588 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 CINPQ9BW66 212 aaPredicted RBP15.39■□□□□ 0.05
CCDC140-201ENST00000295226 FOXQ1Q9C009 403 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 CACNA2D2Q9NY47 1150 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 LHX3Q9UBR4 397 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 HS3ST2Q9Y278 367 aa15.39■□□□□ 0.05
CCDC140-201ENST00000295226 CFAP69A5D8W1 941 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 C5orf60A6NFR6 353 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 METTL18O95568 372 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 ASLP04424 464 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 GKP32189 559 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 IL12RB1P42701 662 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 TNFRSF4P43489 277 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 KIR2DL1P43626 348 aaPredicted RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 DSC2Q02487 901 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 SLC20A2Q08357 652 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 IHHQ14623 411 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 EIF4HQ15056 248 aaKnown RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 INO80DQ53TQ3 878 aaPredicted RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 ZNF852Q6ZMS4 543 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 Q6ZVU0 165 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 JAMLQ86YT9 394 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 UBALD2Q8IYN6 164 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 ZNF513Q8N8E2 541 aaPredicted RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 FATE1Q969F0 183 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 RTP4Q96DX8 246 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 TEKT5Q96M29 485 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 SPATA13Q96N96 652 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 UHRF1Q96T88 793 aaPredicted RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 TRIM31Q9BZY9 425 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 MED4Q9NPJ6 270 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 POLR3BQ9NW08 1133 aaPredicted RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 UBP1Q9NZI7 540 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 SEPT3Q9UH03 358 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 NCOR1O75376 2440 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 INSIG1O15503 277 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 MTSS1O43312 755 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 GCATO75600 419 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 SRPRAP08240 638 aaKnown RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 CHRM1P11229 460 aaPredicted RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 NFKB1P19838 968 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 DRD1P21728 446 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 PRKCHP24723 683 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 TARSP26639 723 aaKnown RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 RHOAP61586 193 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 ST8SIA6P61647 398 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 LMNB2Q03252 620 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 NIPAL4Q0D2K0 466 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 UBXN2BQ14CS0 331 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 C22orf39Q6P5X5 142 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 NUDT18Q6ZVK8 323 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 SUGP1Q8IWZ8 645 aaKnown RBP15.38■□□□□ 0.05
CCDC140-201ENST00000295226 SPATA22Q8NHS9 363 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 CCDC26Q8TAB7 109 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 GRK7Q8WTQ7 553 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 FRS2Q8WU20 508 aa15.38■□□□□ 0.05
CCDC140-201ENST00000295226 UCMAQ8WVF2 138 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms