RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ZBTB14O43829 449 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 AOC1P19801 751 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 CCNCP24863 283 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 ETFBP38117 255 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 HARS2P49590 506 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 CCNHP51946 323 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 EFEMP1Q12805 493 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 LRRC36Q1X8D7 754 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 TCHHL1Q5QJ38 904 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 NAIF1Q69YI7 327 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 SREK1Q8WXA9 508 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 CDH19Q9H159 772 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 ARHGEF38Q9NXL2 777 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 DNAJB4Q9UDY4 337 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 IPO11Q9UI26 975 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 DSEQ9UL01 958 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 M0QZQ0 153 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 ZNF195O14628 629 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 ZNF623O75123 536 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 KLHL2O95198 593 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 PIGNO95427 931 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 SLC1A2P43004 574 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 MAGEA12P43365 314 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 RAB27AP51159 221 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 USP46P62068 366 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 PCID2Q5JVF3 399 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 ATAD1Q8NBU5 361 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 PYDC1Q8WXC3 89 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 NXNL1Q96CM4 212 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 KIFC1Q9BW19 673 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 RHOJQ9H4E5 214 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 XPR1Q9UBH6 696 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 RPL26L1Q9UNX3 145 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 LRRC42Q9Y546 428 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 CDY1Q9Y6F8 540 aa16.02■□□□□ 0.16
NCKIPSD-201ENST00000294129 FAM95CA0A1B0GW59 222 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 ADAMTS4O75173 837 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 ANXA9O76027 345 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 CYP11A1P05108 521 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 SLC35E2BP0CK96 405 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 CCNG1P51959 295 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 CSE1LP55060 971 aaKnown RBP16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 MAPRE1Q15691 268 aaKnown RBP16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 PDCD2Q16342 344 aaPredicted RBP16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 PSMD5Q16401 504 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 FAM219BQ5XKK7 198 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 FRMD7Q6ZUT3 714 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 CLEC14AQ86T13 490 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 LDB1Q86U70 411 aaPredicted RBP16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 MFSD6LQ8IWD5 586 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 DEFB107AQ8IZN7 70 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 FSTL5Q8N475 847 aaPredicted RBP16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 DPF3Q92784 378 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 SUSD3Q96L08 255 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 GPR22Q99680 433 aa16.02■□□□□ 0.15
NCKIPSD-201ENST00000294129 LAMA3Q16787 3333 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 J3KR12 359 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 MATN3O15232 486 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 MAGEC1O60732 1142 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 SMNDC1O75940 238 aaKnown RBP eCLIP16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 CNTN5O94779 1100 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 IGLV3-25P01717 112 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 CPOXP36551 454 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 CDK7P50613 346 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 ARL13AQ5H913 290 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 PIK3R6Q5UE93 754 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 DENND5AQ6IQ26 1287 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 GLB1LQ6UWU2 654 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 SMOC2Q9H3U7 446 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 CYP4F12Q9HCS2 524 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 DNAJC28Q9NX36 388 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 SLC27A5Q9Y2P5 690 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 NEMP2A6NFY4 417 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 ARNTP27540 789 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 RAP1GDS1P52306 607 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 FCGRTP55899 365 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 CAP1Q01518 475 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 TBCCQ15814 346 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 DBN1Q16643 649 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 TMEM198Q66K66 360 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 HAPLN3Q96S86 360 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 ILKAPQ9H0C8 392 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 GMIPQ9P107 970 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 PPM1HQ9ULR3 514 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 ABT1Q9ULW3 272 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 MYLKQ15746 1914 aa16.01■□□□□ 0.15
NCKIPSD-201ENST00000294129 A0A088AWK7 358 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 TMEM233B4DJY2 109 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 TNFRSF10BO14763 440 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 AIM2O14862 343 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 BUD23O43709 281 aaKnown RBP16■□□□□ 0.15
NCKIPSD-201ENST00000294129 CHRM1P11229 460 aaPredicted RBP16■□□□□ 0.15
NCKIPSD-201ENST00000294129 PLK1P53350 603 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 WNT3AP56704 352 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 DSC3Q14574 896 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 ZNF789Q5FWF6 425 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 BRMS1LQ5PSV4 323 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 PPM1LQ5SGD2 360 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 RPS27LQ71UM5 84 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms