RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ZCWPW2A0A1B0GU75 182 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 UBDO15205 165 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 AP1G1O43747 822 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 CABYRO75952 493 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 CYP2C8P10632 490 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 AFAP1L2Q8N4X5 818 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 PNPLA1Q8N8W4 532 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 SLC29A1Q99808 456 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 FTHL17Q9BXU8 183 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 TLL2Q9Y6L7 1015 aa14.91□□□□□ -0.02
CCNF-201ENST00000293968 C22orf31O95567 290 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 TPP2P29144 1249 aaPredicted RBP14.9□□□□□ -0.02
CCNF-201ENST00000293968 STX5Q13190 355 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 SLC25A52Q3SY17 297 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 OR9I1Q8NGQ6 314 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 SPATA22Q8NHS9 363 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 EDEM1Q92611 657 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 PBXIP1Q96AQ6 731 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 TIMMDC1Q9NPL8 285 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 NCKIPSDQ9NZQ3 722 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 MRASO14807 208 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 PMPCBO75439 489 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 NCAM1P13591 858 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 PPP1R3AQ16821 1122 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 GPR141Q7Z602 305 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 NT5DC4Q86YG4 428 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 APPL2Q8NEU8 664 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 DDIT4Q9NX09 232 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 ARHGEF38Q9NXL2 777 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 CEPT1Q9Y6K0 416 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 FAM95CA0A1B0GW59 222 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 TRPC5OSA6NMA1 111 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 PSMD12O00232 456 aaPredicted RBP14.9□□□□□ -0.02
CCNF-201ENST00000293968 SRP72O76094 671 aaKnown RBP14.9□□□□□ -0.02
CCNF-201ENST00000293968 CASP2P42575 452 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 GLUD2P49448 558 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 NUMBP49757 651 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 MAP3K7CLP57077 242 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 TRIM25Q14258 630 aaKnown RBP14.9□□□□□ -0.02
CCNF-201ENST00000293968 KCTD21Q4G0X4 260 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 HFE2Q6ZVN8 426 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 GAB3Q8WWW8 586 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 OTUD5Q96G74 571 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 CNDP1Q96KN2 507 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 FAM210AQ96ND0 272 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 VRTNQ9H8Y1 702 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 PLEKHA5Q9HAU0 1116 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 TMEM165Q9HC07 324 aa14.9□□□□□ -0.02
CCNF-201ENST00000293968 GMPR2Q9P2T1 348 aaKnown RBP14.9□□□□□ -0.02
CCNF-201ENST00000293968 TSPAN1O60635 241 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 HUS1O60921 280 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 H6PDO95479 791 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 ACADSBP45954 432 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 ZBTB17Q13105 803 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 TTLL4Q14679 1199 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 ADRM1Q16186 407 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 LBX2Q6XYB7 198 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 THAP11Q96EK4 314 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 PIGVQ9NUD9 493 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 IGSF9Q9P2J2 1179 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 TCAF2A6NFQ2 919 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 SLC7A2P52569 658 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 STX1BP61266 288 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 EN1Q05925 392 aaPredicted RBP14.89□□□□□ -0.03
CCNF-201ENST00000293968 IKBKEQ14164 716 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 SH3D19Q5HYK7 790 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 STRADAQ7RTN6 431 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 KCNN1Q92952 543 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 C12orf42Q96LP6 360 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 CDHR5Q9HBB8 845 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 EGFL7Q9UHF1 273 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 UTRNP46939 3433 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 SLCO1B7G3V0H7 640 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 PDLIM1O00151 329 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 UGT1A6P19224 532 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 TKTL1P51854 596 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 PCSK7Q16549 785 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 PKDCCQ504Y2 493 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 FBXO47Q5MNV8 452 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 EIF2AQ9BY44 585 aaKnown RBP14.89□□□□□ -0.03
CCNF-201ENST00000293968 PLK2Q9NYY3 685 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 RNF11Q9Y3C5 154 aa14.89□□□□□ -0.03
CCNF-201ENST00000293968 PRSS51A0A1B0GVH4 220 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 PLOD2O00469 737 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 AHSGP02765 367 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 TFPTP0C1Z6 253 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 ZNF470Q6ECI4 717 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 KLHL35Q6PF15 583 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 RIOX2Q8IUF8 465 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 KLHL23Q8NBE8 558 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 KLRG1Q96E93 195 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 OSBPL11Q9BXB4 747 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 COL4A5P29400 1685 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 ATP6V1G1O75348 118 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 MT-CYBP00156 380 aaPredicted RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 HSPA8P11142 646 aaKnown RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 LRPAP1P30533 357 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 ENTPD1P49961 510 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 NDST2P52849 883 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 CSE1LP55060 971 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms