RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 NPHS2Q9NP85 383 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 SCUBE2Q9NQ36 999 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ZNF840PA6NDX5 716 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 SDR42E2A6NKP2 422 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 I6L893 689 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 K7ERQ8 282 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 AGRPO00253 132 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 PHGDHO43175 533 aaKnown RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 PTPN3P26045 913 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 FAM189BP81408 668 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 BIRC2Q13490 618 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 PTPRRQ15256 657 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 CD300LGQ6UXG3 332 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 SRLQ86TD4 932 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 PIK3R5Q8WYR1 880 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ART4Q93070 314 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 SGSM3Q96HU1 749 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 SEC16BQ96JE7 1060 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 EBF3Q9H4W6 596 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ABCB8Q9NUT2 735 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 MTRRQ9UBK8 725 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 UBA2Q9UBT2 640 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 NCF1BA6NI72 391 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 NCF1CA8MVU1 366 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 TOP3BO95985 862 aaKnown RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 PYGBP11216 843 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 NCF1P14598 390 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 TAC1P20366 129 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 USP10Q14694 798 aaKnown RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ARMC2Q8NEN0 867 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 PRCCQ92733 491 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 WBP2Q969T9 261 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 LRGUKQ96M69 825 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 TSPAN18Q96SJ8 248 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ZNF334Q9HCZ1 680 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 RRN3Q9NYV6 651 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 CCL26Q9Y258 94 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 OR51F1A6NGY5 319 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 SPECC1L-ADORA2AF8WAN1 911 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 FAM107AO95990 144 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 CYP11A1P05108 521 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 MZF1P28698 734 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 BMPR1AP36894 532 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 NR2C2P49116 596 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 RENBPP51606 427 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 PLK1P53350 603 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 MLLT6P55198 1093 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 OASLQ15646 514 aaKnown RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ARMC12Q5T9G4 340 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 NAPEPLDQ6IQ20 393 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 LVRNQ6Q4G3 990 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 CHRDL2Q6WN34 429 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ZCCHC23Q6ZST2 131 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 STRA8Q7Z7C7 330 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 CMC1Q7Z7K0 106 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 IGDCC3Q8IVU1 814 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ARID3BQ8IVW6 561 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 C11orf84Q9BUA3 381 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 BRD8Q9H0E9 1235 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 CWH43Q9H720 699 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 MTMR10Q9NXD2 777 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 SCML2Q9UQR0 700 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 ARL2BPQ9Y2Y0 163 aa9.17□□□□□ -0.94
CCDC144B-201ENST00000285176 EP300Q09472 2414 aaPredicted RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 RHOP08100 348 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 SERPINF2P08697 491 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 STK19P49842 368 aaPredicted RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 WNT3AP56704 352 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 TEX44Q53QW1 395 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 ZNF470Q6ECI4 717 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 TEKT4Q8WW24 435 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 GRAMD1AQ96CP6 724 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 ECT2Q9H8V3 914 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 USP15Q9Y4E8 981 aaPredicted RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 HCFC2Q9Y5Z7 792 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 SCN5AQ14524 2016 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 TCRBV9S1A1TA0A576 114 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 TCRBV5S1A1TA0A578 114 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 AGPSO00116 658 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 EFCAB14O75071 495 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 MT-CO1P00395 513 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 SNRPAP09012 282 aaKnown RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 NAPRTQ6XQN6 538 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 PRPF39Q86UA1 669 aaKnown RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 ZCCHC9Q8N567 271 aaKnown RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 SLC43A3Q8NBI5 491 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 PPHLN1Q8NEY8 458 aaKnown RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 NKD2Q969F2 451 aaPredicted RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 ELMO2Q96JJ3 720 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 ZNF778Q96MU6 729 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 TMEM175Q9BSA9 504 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 CYP4F12Q9HCS2 524 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 PSD3Q9NYI0 1048 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 ARID2Q68CP9 1835 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 NOL3O60936 208 aaKnown RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 HLA-DQB2P05538 268 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 ST8SIA6P61647 398 aa9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 RNASEH2BQ5TBB1 312 aaKnown RBP9.16□□□□□ -0.94
CCDC144B-201ENST00000285176 TSSK1BQ9BXA7 367 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms