RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PIK3R1P27986 724 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 SERPINB5P36952 375 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 NUDT2P50583 147 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 PSMD7P51665 324 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 ATXN1P54253 815 aaKnown RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 GJA9P57773 515 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 TUBA4AP68366 448 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 TXNL4AP83876 142 aaKnown RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 NSUN2Q08J23 767 aaKnown RBP eCLIP10.53□□□□□ -0.72
SKA1-201ENST00000285116 SLC9B1Q4ZJI4 515 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 XKR4Q5GH76 650 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 LIPMQ5VYY2 423 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 FBXO16Q8IX29 292 aaPredicted RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 CNTD1Q8N815 330 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 TDRD5Q8NAT2 981 aaKnown RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 URGCPQ8TCY9 931 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 GIPC3Q8TF64 312 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 TOP1MTQ969P6 601 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 PKP2Q99959 881 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 GBA3Q9H227 469 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 NMRAL1Q9HBL8 299 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 BFARQ9NZS9 450 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 A0A096LPK6 155 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 GOLGA8QA0A0J9YX86 632 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 GOLGA8OA6NCC3 632 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 GOLGA8NF8WBI6 632 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 PSMD3O43242 534 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 CD4P01730 458 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 PTPN3P26045 913 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 PPARGP37231 505 aaPredicted RBP10.52□□□□□ -0.72
SKA1-201ENST00000285116 CRADDP78560 199 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 PRKAA1Q13131 559 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 C16orf72Q14CZ0 275 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 CYTH1Q15438 398 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 SLC27A1Q6PCB7 646 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 STRA8Q7Z7C7 330 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 CNTN4Q8IWV2 1026 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 PLD6Q8N2A8 252 aaKnown RBP10.52□□□□□ -0.72
SKA1-201ENST00000285116 LRRN4Q8WUT4 740 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 DPF3Q92784 378 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 PGAP3Q96FM1 320 aaPredicted RBP10.52□□□□□ -0.72
SKA1-201ENST00000285116 ZMAT2Q96NC0 199 aaKnown RBP10.52□□□□□ -0.72
SKA1-201ENST00000285116 LENG8Q96PV6 779 aaPredicted RBP10.52□□□□□ -0.72
SKA1-201ENST00000285116 HNRNPABQ99729 332 aaKnown RBP10.52□□□□□ -0.72
SKA1-201ENST00000285116 SLX1AQ9BQ83 275 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 PRDM12Q9H4Q4 367 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 SETD4Q9NVD3 440 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 VANGL2Q9ULK5 521 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 AKT3Q9Y243 479 aa10.52□□□□□ -0.72
SKA1-201ENST00000285116 TARM1B6A8C7 271 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 AIM2O14862 343 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 CACNG3O60359 315 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 STT3AP46977 705 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 CD151P48509 253 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 SULT1E1P49888 294 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 ENTPD1P49961 510 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 RPL14P50914 215 aaKnown RBP10.52□□□□□ -0.73
SKA1-201ENST00000285116 THOP1P52888 689 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 OXCT1P55809 520 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 GSTM4Q03013 218 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 KCTD2Q14681 263 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 ANO4Q32M45 955 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 MAMDC4Q6UXC1 1216 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 MAPK15Q8TD08 544 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 HDAC11Q96DB2 347 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 DUS3LQ96G46 650 aaKnown RBP10.52□□□□□ -0.73
SKA1-201ENST00000285116 ZNF560Q96MR9 790 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 CDRT15Q96T59 188 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 GATA5Q9BWX5 397 aaPredicted RBP10.52□□□□□ -0.73
SKA1-201ENST00000285116 OXCT2Q9BYC2 517 aaPredicted RBP10.52□□□□□ -0.73
SKA1-201ENST00000285116 DPEP3Q9H4B8 488 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 LIN28AQ9H9Z2 209 aaKnown RBP10.52□□□□□ -0.73
SKA1-201ENST00000285116 PFDN4Q9NQP4 134 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 VPS45Q9NRW7 570 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 INIPQ9NRY2 104 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 UTP6Q9NYH9 597 aaKnown RBP10.52□□□□□ -0.73
SKA1-201ENST00000285116 UBQLN1Q9UMX0 589 aaKnown RBP10.52□□□□□ -0.73
SKA1-201ENST00000285116 KCNH4Q9UQ05 1017 aa10.52□□□□□ -0.73
SKA1-201ENST00000285116 BCAS2O75934 225 aaPredicted RBP10.51□□□□□ -0.73
SKA1-201ENST00000285116 XRCC1P18887 633 aaPredicted RBP10.51□□□□□ -0.73
SKA1-201ENST00000285116 WARSP23381 471 aaKnown RBP10.51□□□□□ -0.73
SKA1-201ENST00000285116 GJA5P36382 358 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 NAA20P61599 178 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 BTG3Q14201 252 aaPredicted RBP10.51□□□□□ -0.73
SKA1-201ENST00000285116 Q3C1V9 767 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 DSELQ8IZU8 1212 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 PYROXD2Q8N2H3 581 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 TMEM102Q8N9M5 508 aaPredicted RBP10.51□□□□□ -0.73
SKA1-201ENST00000285116 BHLHE22Q8NFJ8 381 aaPredicted RBP10.51□□□□□ -0.73
SKA1-201ENST00000285116 DQX1Q8TE96 717 aaKnown RBP10.51□□□□□ -0.73
SKA1-201ENST00000285116 STYXQ8WUJ0 223 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 COPS5Q92905 334 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 TMIGD2Q96BF3 282 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 MAELQ96JY0 434 aaKnown RBP10.51□□□□□ -0.73
SKA1-201ENST00000285116 COX4I2Q96KJ9 171 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 RANBP9Q96S59 729 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 MAGEB5Q9BZ81 275 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 LRRC4Q9HBW1 653 aa10.51□□□□□ -0.73
SKA1-201ENST00000285116 VTA1Q9NP79 307 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms