RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 C5orf60A6NFR6 353 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 TP73O15350 636 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 TULP3O75386 442 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 GCATO75600 419 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 CHKAP35790 457 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 SLC11A2P49281 568 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 AP1B1Q10567 949 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 SRSF5Q13243 272 aaKnown RBP18.18■□□□□ 0.5
SEC22C-202ENST00000273156 AUHQ13825 339 aaKnown RBP18.18■□□□□ 0.5
SEC22C-202ENST00000273156 USP39Q53GS9 565 aaKnown RBP18.18■□□□□ 0.5
SEC22C-202ENST00000273156 CFAP58Q5T655 872 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 PPIL6Q8IXY8 311 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 CCDC33Q8N5R6 958 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 FAM160A2Q8N612 972 aaPredicted RBP18.18■□□□□ 0.5
SEC22C-202ENST00000273156 ZC3H10Q96K80 434 aaKnown RBP18.18■□□□□ 0.5
SEC22C-202ENST00000273156 LGMNQ99538 433 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 BBS2Q9BXC9 721 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 ZYG11BQ9C0D3 744 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 SHOC2Q9UQ13 582 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 ATP8A1Q9Y2Q0 1164 aa18.18■□□□□ 0.5
SEC22C-202ENST00000273156 HELZP42694 1942 aaKnown RBP18.18■□□□□ 0.5
SEC22C-202ENST00000273156 MYO16Q9Y6X6 1858 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 WASH4PA8MWX3 477 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 MTSS1O43312 755 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 CACNG3O60359 315 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 PMS2P54278 862 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 PRKD1Q15139 912 aaPredicted RBP18.17■□□□□ 0.5
SEC22C-202ENST00000273156 CRY1Q16526 586 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 RNASEH2BQ5TBB1 312 aaKnown RBP18.17■□□□□ 0.5
SEC22C-202ENST00000273156 GRAMD4Q6IC98 578 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 C14orf80Q86SX3 495 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 HOOK3Q86VS8 718 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 C12orf40Q86WS4 652 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 RTL3Q8N8U3 475 aaKnown RBP18.17■□□□□ 0.5
SEC22C-202ENST00000273156 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
SEC22C-202ENST00000273156 AZIN2Q96A70 460 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 POLMQ9NP87 494 aaPredicted RBP18.17■□□□□ 0.5
SEC22C-202ENST00000273156 VANGL2Q9ULK5 521 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 NEU3Q9UQ49 428 aa18.17■□□□□ 0.5
SEC22C-202ENST00000273156 GOLGA6BA6NDN3 693 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 STC2O76061 302 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 RHOBTB1O94844 696 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 TYRP14679 529 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 RHOQP17081 205 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 KIR2DL1P43626 348 aaPredicted RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 BASP1P80723 227 aaKnown RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 KDSRQ06136 332 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 GALNT2Q10471 571 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 E2F5Q15329 346 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 CSRP2Q16527 193 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 RAP1GAP2Q684P5 730 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 Q6ZNB5 142 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 CCDC25Q86WR0 208 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 PHTF2Q8N3S3 785 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 ZCCHC9Q8N567 271 aaKnown RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 NPWQ8N729 165 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 NAT16Q8N8M0 369 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 TERB1Q8NA31 727 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 UBLCP1Q8WVY7 318 aaPredicted RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 HDAC11Q96DB2 347 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 RMDN1Q96DB5 314 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 P2RY11Q96G91 374 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 TXLNGYQ9BZA5 131 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 DNAJC17Q9NVM6 304 aaKnown RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 DLL3Q9NYJ7 618 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 PCDHGA5Q9Y5G8 931 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 CEP250Q9BV73 2442 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 IGLV3-10A0A075B6K4 115 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 DRGXA6NNA5 263 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 NEDD8-MDP1E9PL57 170 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 ACSL4O60488 711 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 KLF8O95600 359 aaPredicted RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 TGM1P22735 817 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 TIE1P35590 1138 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 HSD17B3P37058 310 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 ZNF33AQ06730 810 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 PPIDQ08752 370 aaKnown RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 SPEM2Q0P670 501 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 FBXL22Q6P050 247 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 ARHGEF18Q6ZSZ5 1173 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 RASSF3Q86WH2 238 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 CHSY1Q86X52 802 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 LRRC49Q8IUZ0 686 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 ZNF683Q8IZ20 524 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 IL17RCQ8NAC3 791 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 TXNDC5Q8NBS9 432 aaKnown RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 LRRN4Q8WUT4 740 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 CPT1BQ92523 772 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 WBP2Q969T9 261 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 RUFY1Q96T51 708 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 PRMT1Q99873 361 aaKnown RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 KLC2Q9H0B6 622 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 RAB6BQ9NRW1 208 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 SEMA4GQ9NTN9 838 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 CDV3Q9UKY7 258 aaKnown RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 STARD13Q9Y3M8 1113 aa18.16■□□□□ 0.5
SEC22C-202ENST00000273156 FARP1Q9Y4F1 1045 aaPredicted RBP18.16■□□□□ 0.5
SEC22C-202ENST00000273156 F5H5T6 163 aa18.15■□□□□ 0.5
SEC22C-202ENST00000273156 ZBTB24O43167 697 aaPredicted RBP18.15■□□□□ 0.5
SEC22C-202ENST00000273156 GARSP41250 739 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms