RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 FBXO6Q9NRD1 293 aaPredicted RBP20.49■□□□□ 0.87
UBE2F-201ENST00000272930 TRIM17Q9Y577 477 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 C2orf71A6NGG8 1288 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 ARNTP27540 789 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 GMPRP36959 345 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 KPNA1P52294 538 aaPredicted RBP20.49■□□□□ 0.87
UBE2F-201ENST00000272930 WNT3AP56704 352 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 SLC10A7Q0GE19 358 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 MARC1Q5VT66 337 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 SLC8B1Q6J4K2 584 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 PPP1R14CQ8TAE6 165 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 GIPC2Q8TF65 315 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 UTP4Q969X6 686 aaKnown RBP20.49■□□□□ 0.87
UBE2F-201ENST00000272930 RAB3IPQ96QF0 476 aaPredicted RBP20.49■□□□□ 0.87
UBE2F-201ENST00000272930 SP110Q9HB58 689 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 VPS45Q9NRW7 570 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 TREX1Q9NSU2 369 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 ZNF358Q9NW07 568 aa20.49■□□□□ 0.87
UBE2F-201ENST00000272930 CCDC78A2IDD5 438 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 SIN3BO75182 1162 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 SERPINE1P05121 402 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 C2P06681 752 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 HMBSP08397 361 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 GRK2P25098 689 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 ABCG1P45844 678 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 ESRP1Q6NXG1 681 aaKnown RBP20.48■□□□□ 0.87
UBE2F-201ENST00000272930 C10orf107Q8IVU9 208 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.48■□□□□ 0.87
UBE2F-201ENST00000272930 ACVR1CQ8NER5 493 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 OR6Y1Q8NGX8 325 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 PSMG2Q969U7 264 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 SIKE1Q9BRV8 207 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 TUBB6Q9BUF5 446 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 CAB39LQ9H9S4 337 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 NT5MQ9NPB1 228 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 MTRRQ9UBK8 725 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 ADAM12O43184 909 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 PARNO95453 639 aaKnown RBP20.48■□□□□ 0.87
UBE2F-201ENST00000272930 ZBTB16Q05516 673 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 GRM3Q14832 879 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 DLG2Q15700 870 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 UGP2Q16851 508 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 PARP15Q460N3 678 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 NADSYN1Q6IA69 706 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 RNF168Q8IYW5 571 aaPredicted RBP20.48■□□□□ 0.87
UBE2F-201ENST00000272930 RPRD1AQ96P16 312 aaPredicted RBP20.48■□□□□ 0.87
UBE2F-201ENST00000272930 PRKD2Q9BZL6 878 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 WWP1Q9H0M0 922 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 HIPK3Q9H422 1215 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 OGDHLQ9ULD0 1010 aa20.48■□□□□ 0.87
UBE2F-201ENST00000272930 ITM2AO43736 263 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 VAPBO95292 243 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 MMP2P08253 660 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 CPA3P15088 417 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 GABRB3P28472 473 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 CHRNA4P43681 627 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 SLC1A6P48664 564 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 MAPKAPK2P49137 400 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 CCL23P55773 120 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 YBEYP58557 167 aaPredicted RBP20.47■□□□□ 0.87
UBE2F-201ENST00000272930 IL10RBQ08334 325 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 KRT72Q14CN4 511 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 KIAA0930Q6ICG6 404 aaPredicted RBP20.47■□□□□ 0.87
UBE2F-201ENST00000272930 MAGEC3Q8TD91 643 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 DEFB118Q96PH6 123 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 KLHL5Q96PQ7 755 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 CDK5RAP1Q96SZ6 601 aaKnown RBP20.47■□□□□ 0.87
UBE2F-201ENST00000272930 BACE2Q9Y5Z0 518 aa20.47■□□□□ 0.87
UBE2F-201ENST00000272930 E2F8A0AVK6 867 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 RAMP2O60895 175 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 AHSGP02765 367 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 ATP5BP06576 529 aaKnown RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 PTPN4P29074 926 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 IRF9Q00978 393 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 SERINC3Q13530 473 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 POLD3Q15054 466 aaPredicted RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 USP41Q3LFD5 358 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 C5orf22Q49AR2 442 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 ANKRD33Q7Z3H0 272 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 PIWIL2Q8TC59 973 aaKnown RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 TADA1Q96BN2 335 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 PABPC5Q96DU9 382 aaKnown RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 PTCD3Q96EY7 689 aaKnown RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 PRR11Q96HE9 360 aaPredicted RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 ATXN3LQ9H3M9 355 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 NOD2Q9HC29 1040 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 ARL8BQ9NVJ2 186 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 MARCOQ9UEW3 520 aaPredicted RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 SLC2A6Q9UGQ3 507 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 FCHO1O14526 889 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 KITP10721 976 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 PAMP19021 973 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 TACR2P21452 398 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 ALDH7A1P49419 539 aaKnown RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 AQP5P55064 265 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 SNX30Q5VWJ9 437 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 CIR1Q86X95 450 aaPredicted RBP20.46■□□□□ 0.87
UBE2F-201ENST00000272930 NSMCE1Q8WV22 266 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 MYEOVQ96EZ4 313 aa20.46■□□□□ 0.87
UBE2F-201ENST00000272930 RANBP9Q96S59 729 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms