RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 RPP40O75818 363 aaKnown RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 KRT10P13645 584 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 IL1R2P27930 398 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 MZF1P28698 734 aaPredicted RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 AIF1P55008 147 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 CAV1Q03135 178 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 DHX9Q08211 1270 aaKnown RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 ZNF177Q13360 481 aaPredicted RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 ZDHHC24Q6UX98 284 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 SETD3Q86TU7 594 aaPredicted RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 ALYREFQ86V81 257 aaKnown RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 CCDC89Q8N998 374 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 BBOF1Q8ND07 529 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 UBLCP1Q8WVY7 318 aaPredicted RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 ART4Q93070 314 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 SNF8Q96H20 258 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 ZC3H10Q96K80 434 aaKnown RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 FEM1AQ9BSK4 669 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 MAGEB5Q9BZ81 275 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 RETREG1Q9H6L5 497 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 NEU3Q9UQ49 428 aa12.93□□□□□ -0.34
SGCE-201ENST00000265735 DRG1Q9Y295 367 aaKnown RBP12.93□□□□□ -0.34
SGCE-201ENST00000265735 CHD5Q8TDI0 1954 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 C3orf70A6NLC5 250 aaPredicted RBP12.92□□□□□ -0.34
SGCE-201ENST00000265735 FAM72CH0Y354 149 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 LIASO43766 372 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 GFRA3O60609 400 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 SRPRAP08240 638 aaKnown RBP12.92□□□□□ -0.34
SGCE-201ENST00000265735 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
SGCE-201ENST00000265735 CAMK2GQ13555 558 aaPredicted RBP12.92□□□□□ -0.34
SGCE-201ENST00000265735 BYSLQ13895 437 aaKnown RBP12.92□□□□□ -0.34
SGCE-201ENST00000265735 SIM2Q14190 667 aaPredicted RBP12.92□□□□□ -0.34
SGCE-201ENST00000265735 SLMAPQ14BN4 828 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 TERF2Q15554 542 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 TAZQ16635 292 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 SMTNL2Q2TAL5 461 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 FAM72AQ5TYM5 149 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 FAM72DQ6L9T8 149 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 SERPINA13PQ6UXR4 307 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 GSTA5Q7RTV2 222 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 FAM72BQ86X60 149 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 FBXO25Q8TCJ0 367 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 HMGB4Q8WW32 186 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 MRGPRX1Q96LB2 322 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 TPSD1Q9BZJ3 242 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 ZYG11BQ9C0D3 744 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 TSPYL1Q9H0U9 437 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 MPP6Q9NZW5 540 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 FZD10Q9ULW2 581 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 SMG5Q9UPR3 1016 aaKnown RBP12.92□□□□□ -0.34
SGCE-201ENST00000265735 ERVW-1Q9UQF0 538 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 PLAAQ9Y263 795 aa12.92□□□□□ -0.34
SGCE-201ENST00000265735 GOLGA6L10A6NI86 522 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 NDC80O14777 642 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 EPHX1P07099 455 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 NDUFV2P19404 249 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 L1CAMP32004 1257 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 ADCY8P40145 1251 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 P2RY2P41231 377 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 CTSOP43234 321 aaPredicted RBP12.91□□□□□ -0.34
SGCE-201ENST00000265735 ECT2LQ008S8 904 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 STARD3Q14849 445 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 GLIPR1L2Q4G1C9 344 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 USP39Q53GS9 565 aaKnown RBP12.91□□□□□ -0.34
SGCE-201ENST00000265735 BOLA3Q53S33 107 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 KCNT1Q5JUK3 1230 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 METTL3Q86U44 580 aaKnown RBP12.91□□□□□ -0.34
SGCE-201ENST00000265735 NLRP14Q86W24 1093 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 MAP7D3Q8IWC1 876 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 TEKT4Q8WW24 435 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 HSPH1Q92598 858 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 ZBTB9Q96C00 473 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 TXLNGYQ9BZA5 131 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 MKRN2Q9H000 416 aaKnown RBP12.91□□□□□ -0.34
SGCE-201ENST00000265735 ATP8A1Q9Y2Q0 1164 aa12.91□□□□□ -0.34
SGCE-201ENST00000265735 SPAG17Q6Q759 2223 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 GOLGA6CA6NDK9 693 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 SYNCRIPO60506 623 aaKnown RBP12.9□□□□□ -0.34
SGCE-201ENST00000265735 LRIG2O94898 1065 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 GOLGA6DP0CG33 693 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 HLA-EP13747 358 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 COPAP53621 1224 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 PMS2P54278 862 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 SULT2A1Q06520 285 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 SEMA3BQ13214 749 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 PDK2Q15119 407 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 UAP1Q16222 522 aaPredicted RBP12.9□□□□□ -0.34
SGCE-201ENST00000265735 MAP7D1Q3KQU3 841 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 FNDC3BQ53EP0 1204 aaKnown RBP12.9□□□□□ -0.34
SGCE-201ENST00000265735 C6orf118Q5T5N4 469 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 SCYL2Q6P3W7 929 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 ZNF783Q6ZMS7 281 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 BBS12Q6ZW61 710 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 CYP4V2Q6ZWL3 525 aaPredicted RBP12.9□□□□□ -0.34
SGCE-201ENST00000265735 MAK16Q9BXY0 300 aaKnown RBP12.9□□□□□ -0.34
SGCE-201ENST00000265735 GOLGA6AQ9NYA3 693 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 BCCIPQ9P287 314 aaKnown RBP eCLIP12.9□□□□□ -0.34
SGCE-201ENST00000265735 SUN2Q9UH99 717 aa12.9□□□□□ -0.34
SGCE-201ENST00000265735 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms