RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 NCALDP61601 193 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 ARHGAP1Q07960 439 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 CTBP1Q13363 440 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 CCDC185Q8N715 623 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 PLEKHO2Q8TD55 490 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 RHOJQ9H4E5 214 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 MPP6Q9NZW5 540 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 TRIM17Q9Y577 477 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 SMARCB1Q12824 385 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 ITGA7Q13683 1181 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 USP41Q3LFD5 358 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 CERCAMQ5T4B2 595 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 PATL1Q86TB9 770 aaKnown RBP16.92■□□□□ 0.3
PHRF1-201ENST00000264555 RNF148Q8N7C7 305 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 VPS33AQ96AX1 596 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 MLPHQ9BV36 600 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-201ENST00000264555 COX4I1P13073 169 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 TFEBP19484 476 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 LACTB2Q53H82 288 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-201ENST00000264555 DENND1CQ8IV53 801 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 P3H2Q8IVL5 708 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 WDR41Q9HAD4 459 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 GIMAP4Q9NUV9 329 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 TMCO1Q9UM00 188 aa16.92■□□□□ 0.3
PHRF1-201ENST00000264555 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
PHRF1-201ENST00000264555 MGAT4DA6NG13 374 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 ATP6V1E1P36543 226 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 PIK3CGP48736 1102 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 POLR2LP62875 67 aaKnown RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 CDK18Q07002 472 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 ERAP2Q6P179 960 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 DLG3Q92796 817 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 ZNF558Q96NG5 402 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 ACBD6Q9BR61 282 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 VPS45Q9NRW7 570 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 RABGEF1Q9UJ41 708 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 AHDC1Q5TGY3 1603 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 TLR5O60602 858 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 MAPK8P45983 427 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 CLCNKBP51801 687 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 SLC25A3Q00325 362 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 FAM187BQ17R55 369 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 CDCA2Q69YH5 1023 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 LRRC8DQ7L1W4 858 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 C7orf43Q8WVR3 580 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 FAM120BQ96EK7 910 aaKnown RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 NDNQ99608 321 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 COMMD8Q9NX08 183 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 LTBP3Q9NS15 1303 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 BUD23O43709 281 aaKnown RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 TTPAP49638 278 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 MAXP61244 160 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 ANKS1BQ7Z6G8 1248 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 ZNF467Q7Z7K2 595 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 ZNF557Q8N988 423 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 SPPL2BQ8TCT7 592 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 DTNBP1Q96EV8 351 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 ZNF184Q99676 751 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 RNF208Q9H0X6 261 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 MRPL17Q9NRX2 175 aaKnown RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 TEKT2Q9UIF3 430 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 LBPP18428 481 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 CES1P23141 567 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 DGKAP23743 735 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 WEE1P30291 646 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 CMC1Q7Z7K0 106 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 PTGR2Q8N8N7 351 aaPredicted RBP16.91■□□□□ 0.3
PHRF1-201ENST00000264555 MCOLN3Q8TDD5 553 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 XPR1Q9UBH6 696 aa16.91■□□□□ 0.3
PHRF1-201ENST00000264555 RGSL1A5PLK6 1076 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 STK25O00506 426 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 CLPTM1O96005 669 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 FGF1P05230 155 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 PBLDP30039 288 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-201ENST00000264555 CACNA2D1P54289 1103 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 TMEM192Q8IY95 271 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 FETUBQ9UGM5 382 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 STYXL1Q9Y6J8 313 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 C15orf38-AP3S2A0A0A6YYH1 394 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 A0A1W2PQH9 124 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 AP2A1O95782 977 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 ARPINQ7Z6K5 226 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 PCDH19Q8TAB3 1148 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 TMEM159Q96B96 161 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 BTN2A3PQ96KV6 586 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 NSMCE2Q96MF7 247 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 SEMA4BQ9NPR2 832 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-201ENST00000264555 LNPEPQ9UIQ6 1025 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 RNASEH1O60930 286 aaKnown RBP16.9■□□□□ 0.3
PHRF1-201ENST00000264555 FAM155BO75949 473 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 ARIH2O95376 493 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 HLA-DPA1P20036 260 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 NOGQ13253 232 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 FAM126BQ8IXS8 530 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 OMDQ99983 421 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 NFKBIZQ9BYH8 718 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 FAM126AQ9BYI3 521 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-201ENST00000264555 CLCA2Q9UQC9 943 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms