RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TBC1D31Q96DN5 1066 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 ARHGEF26Q96DR7 871 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 DUSP23Q9BVJ7 150 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 NRSN2Q9GZP1 204 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 OSBPL2Q9H1P3 480 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 ANLNQ9NQW6 1124 aa12.48□□□□□ -0.41
TRAF4-202ENST00000262396 IGLV3-10A0A075B6K4 115 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 BUB1O43683 1085 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 MT-CO3P00414 261 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 KRT3P12035 628 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 RHOQP17081 205 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 ACP1P24666 158 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 ITGB7P26010 798 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 SOX5P35711 763 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 RABIFP47224 123 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 MAPKAPK2P49137 400 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 THOP1P52888 689 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 CAMK2BQ13554 666 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 C15orf59Q2T9L4 293 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-202ENST00000262396 EFHC2Q5JST6 749 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 SFMBT2Q5VUG0 894 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 ZSCAN30Q86W11 494 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 NEK11Q8NG66 645 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 OR6K2Q8NGY2 324 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 OR4C6Q8NH72 309 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 SLC30A5Q8TAD4 765 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 EPS8L1Q8TE68 723 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 SLC20A1Q8WUM9 679 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 TSC1Q92574 1164 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 GLMNQ92990 594 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 NT5C3BQ969T7 300 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 RAB7BQ96AH8 199 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 FAM131CQ96AQ9 280 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 C1QTNF7Q9BXJ2 289 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 ADAM22Q9P0K1 906 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 PPARGC1AQ9UBK2 798 aaKnown RBP12.47□□□□□ -0.41
TRAF4-202ENST00000262396 DOLKQ9UPQ8 538 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 HS3ST3A1Q9Y663 406 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 GOLGA4Q13439 2230 aaKnown RBP12.47□□□□□ -0.41
TRAF4-202ENST00000262396 PKD1L2Q7Z442 2459 aa12.47□□□□□ -0.41
TRAF4-202ENST00000262396 TRIM38O00635 465 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 TSPAN6O43657 245 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 PIAS2O75928 621 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 CALB1P05937 261 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 PLEKP08567 350 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-202ENST00000262396 GPD1P21695 349 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 ADRA1BP35368 520 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 ACVRL1P37023 503 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.41
TRAF4-202ENST00000262396 PDE1CQ14123 709 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-202ENST00000262396 PTK2BQ14289 1009 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 PROX2Q3B8N5 592 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 LEKR1Q6ZMV7 388 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 ARCQ7LC44 396 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 TTC7BQ86TV6 843 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 PARGQ86W56 976 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 ZNF683Q8IZ20 524 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 TMEM145Q8NBT3 493 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 MAPK15Q8TD08 544 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 LMX1AQ8TE12 382 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 CXorf40AQ8TE69 158 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 FAM172AQ8WUF8 416 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 DEPDC7Q96QD5 511 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 LGMNQ99538 433 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 IL12RB2Q99665 862 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 OSBPL1AQ9BXW6 950 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 MAGEH1Q9H213 219 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 SYNDIG1Q9H7V2 258 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 UCKL1Q9NWZ5 548 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 NLGN3Q9NZ94 848 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 TMEM59LQ9UK28 342 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 ZFR2Q9UPR6 939 aaKnown RBP12.46□□□□□ -0.41
TRAF4-202ENST00000262396 FADS3Q9Y5Q0 445 aa12.46□□□□□ -0.41
TRAF4-202ENST00000262396 A0A087WV48 116 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 CPED1A4D0V7 1026 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 ZSCAN5CA6NGD5 496 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-202ENST00000262396 IGLON5A6NGN9 336 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 C16orf96A6NNT2 1141 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 GOLGA6L22H0YM25 854 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 CREB3O43889 395 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 POP4O95707 220 aaKnown RBP12.45□□□□□ -0.42
TRAF4-202ENST00000262396 IGSF6O95976 241 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 UGT2B4P06133 528 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 CCDC172P0C7W6 258 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 MMP8P22894 467 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 EPHB2P29323 1055 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 RPIAP49247 311 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 RHOAP61586 193 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 ARF5P84085 180 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 INSM1Q01101 510 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-202ENST00000262396 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 CCDC14Q49A88 953 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 ZNF805Q5CZA5 627 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 BROXQ5VW32 411 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 DNAJC24Q6P3W2 148 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 DCUN1D2Q6PH85 259 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 KYAT3Q6YP21 454 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms