RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SP110Q9HB58 689 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 CYP4F11Q9HBI6 524 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 SMPD4Q9NXE4 827 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 NKX1-2Q9UD57 310 aaPredicted RBP13.78□□□□□ -0.2
VMP1-201ENST00000262291 HOXA2O43364 376 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 TYK2P29597 1187 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 OR1E1P30953 314 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 SLC6A4P31645 630 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 AVPR1AP37288 418 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 SERPINB9P50453 376 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 IRF9Q00978 393 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 CDH17Q12864 832 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 PLD1Q13393 1074 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 USP41Q3LFD5 358 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 TEDDM1Q5T9Z0 273 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 NAPEPLDQ6IQ20 393 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 DENND5AQ6IQ26 1287 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 ANO7Q6IWH7 933 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 TMEM135Q86UB9 458 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 TRIM74Q86UV6 250 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 TRIM73Q86UV7 250 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 PLD6Q8N2A8 252 aaKnown RBP13.78□□□□□ -0.2
VMP1-201ENST00000262291 C10orf82Q8WW14 230 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 IGSF21Q96ID5 467 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 BTN2A3PQ96KV6 586 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 C20orf27Q9GZN8 174 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 CHKBQ9Y259 395 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 PLXNA3P51805 1871 aa13.78□□□□□ -0.2
VMP1-201ENST00000262291 A0A0D9SEW6 157 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 TSPAN3O60637 253 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 VAPBO95292 243 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 PEX11BO96011 259 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 CXCL10P02778 98 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 SLC2A3P11169 496 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 CCNFP41002 786 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 RPS24P62847 133 aaKnown RBP13.77□□□□□ -0.2
VMP1-201ENST00000262291 ROR2Q01974 943 aaKnown RBP13.77□□□□□ -0.2
VMP1-201ENST00000262291 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.2
VMP1-201ENST00000262291 CTBP1Q13363 440 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 IKBKEQ14164 716 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 AFMIDQ63HM1 303 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 RGS9BPQ6ZS82 235 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 DENND1CQ8IV53 801 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 NUDCD3Q8IVD9 361 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 DENND6AQ8IWF6 608 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 OR52K2Q8NGK3 314 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 MOCOSQ96EN8 888 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 PRR11Q96HE9 360 aaPredicted RBP13.77□□□□□ -0.2
VMP1-201ENST00000262291 MRGPRX2Q96LB1 330 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 BEGAINQ9BUH8 593 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 EMCNQ9ULC0 261 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 GREB1Q4ZG55 1949 aa13.77□□□□□ -0.2
VMP1-201ENST00000262291 FAM237BA0A1B0GVD1 139 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 FAM92AA1XBS5 289 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 LYPLA1O75608 230 aaPredicted RBP13.77□□□□□ -0.21
VMP1-201ENST00000262291 PRKCGP05129 697 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 RHOQP17081 205 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 GP5P40197 560 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 SGSHP51688 502 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 POLE2P56282 527 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 WNT3AP56704 352 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 MPP1Q00013 466 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 BST1Q10588 318 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 FSTL4Q6MZW2 842 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 MFN1Q8IWA4 741 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 TNS4Q8IZW8 715 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 LZTR1Q8N653 840 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 BHMTQ93088 406 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 MTBPQ96DY7 904 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 C1orf74Q96LT6 269 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 FCRL5Q96RD9 977 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 TMEM175Q9BSA9 504 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 NAT9Q9BTE0 207 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 CLIC5Q9NZA1 410 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 MYLKQ15746 1914 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 C2orf78A6NCI8 922 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 BUD23O43709 281 aaKnown RBP13.77□□□□□ -0.21
VMP1-201ENST00000262291 DNAJC6O75061 913 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 USP1O94782 785 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 CSF2RAP15509 400 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 TACR2P21452 398 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 GLDCP23378 1020 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 POLD3Q15054 466 aaPredicted RBP13.77□□□□□ -0.21
VMP1-201ENST00000262291 CNGA3Q16281 694 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 RNF220Q5VTB9 566 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 ZNF449Q6P9G9 518 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 PGBD5Q8N414 524 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 SPON2Q9BUD6 331 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 IL22Q9GZX6 179 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 SNX15Q9NRS6 342 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 TMEM216Q9P0N5 145 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 SOX13Q9UN79 622 aa13.77□□□□□ -0.21
VMP1-201ENST00000262291 DOCK4Q8N1I0 1966 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 LUC7L3O95232 432 aaKnown RBP13.76□□□□□ -0.21
VMP1-201ENST00000262291 NPY2RP49146 381 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 ZNF460Q14592 562 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 C16orf59Q7L2K0 433 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms